| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3519 |
|---|
| Symbol | |
|---|
| ID | 6486457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 3413731 |
|---|
| End bp | 3414774 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642738802 |
|---|
| Product | galactitol-1-phosphate dehydrogenase |
|---|
| Protein accession | YP_002042521 |
|---|
| Protein GI | 194445533 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 88 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAG TGGTTATTCA CGCTGAGGGA GACGTGCGCG TTGAAGAACG CCCCTTACCA
CAACTGCAAG CCGAGGACGA TGTGTTGGTC AAGGTCGTTA GCTCAGGGCT TTGCGGGTCG
GATATCCCGC GTATTTTCGC GCAGGGCGCC CATTATTATC CTATTACGTT AGGTCATGAA
TTCAGCGGCT ACGTTGAATC CTACGGCACA GGCGTAACGG ATATGCAGCC CGGCGATGCC
GTCGCTTGTG TCCCGCTTCT TCCCTGCTTT CACTGTCCGC AATGCGAACG CGGTTACTTT
TCTTTATGCA AACAGTATCA GTTTGTAGGA TCGCGCAGCG AAGGCGGTAA TGCGGAATAT
GTGGTGGTCA AACGGGCCAA TCTTTTCCGC TTGCCGTCTG ATATGCCAAT TGAAGATGGC
GCGTTTATCG AACCGATTAC CGTGGGCTTA CACGCCTTTC ATCTGGCGCA GGGCTGCGAG
GGGAAAAACG TAATTATCGT CGGGGCCGGG ACAATTGGCC TGCTGGCCTT ACAGTGCGCG
CGGGAACTGG GCGCGCGAAG CGTAACGGCG ATTGATATCA ATCCGCAGAA ACTGGAACTT
GCGAAAGCGC TCGGCGCAAC GCATACCTGT AATAGCCGGG AAATGACCGC CGACGACATC
CAGACCGCGT TGTCCGACAT TCAGTTTGAT CAACTGGTTC TCGAAACGGC AGGAACTCCC
CAGACCGTCT CGCTGGCTAT CGATATCGCC GGGCCGCGCG CGCAACTGGC GCTGGTGGGG
ACGTTACATC ACGATCTCAC CATGACAACG CGTACATTCG GGCTAATTTT GCGTAAAGAG
CTCACGCTCC TCGGCAGTTG GATGAACTAC TCCGCGCCAT GGCCAGGAGA AGAATGGGAA
ACCGCAGCGC GCCTGTTGGC TGAAAAACGT CTTCAACTGA CCCCTCTCAT TGCCCATCGC
GGCGATGCGG AAAGCTTTGC AGAAGCAGTC AAAGCGCTTA ATGGCGCGCC CATGCAGGGC
AAAATCTTAC TTCAACTTTC CTGA
|
|---|
| Protein sequence | MKSVVIHAEG DVRVEERPLP QLQAEDDVLV KVVSSGLCGS DIPRIFAQGA HYYPITLGHE
FSGYVESYGT GVTDMQPGDA VACVPLLPCF HCPQCERGYF SLCKQYQFVG SRSEGGNAEY
VVVKRANLFR LPSDMPIEDG AFIEPITVGL HAFHLAQGCE GKNVIIVGAG TIGLLALQCA
RELGARSVTA IDINPQKLEL AKALGATHTC NSREMTADDI QTALSDIQFD QLVLETAGTP
QTVSLAIDIA GPRAQLALVG TLHHDLTMTT RTFGLILRKE LTLLGSWMNY SAPWPGEEWE
TAARLLAEKR LQLTPLIAHR GDAESFAEAV KALNGAPMQG KILLQLS
|
|---|
| |