| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3518 |
|---|
| Symbol | |
|---|
| ID | 6485686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 3412314 |
|---|
| End bp | 3413687 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642738801 |
|---|
| Product | PTS family galactitol-specific enzyme IIC |
|---|
| Protein accession | YP_002042520 |
|---|
| Protein GI | 194446386 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3775] Phosphotransferase system, galactitol-specific IIC component |
|---|
| TIGRFAM ID | [TIGR00827] PTS system, galactitol-specific IIC component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 82 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAGCG AAATAATGCG TTATATCCTC GACTTAGGCC CAACGGTGAT GTTGCCTCTG
GTGATCATCG TGTTCTCTAA ACTGCTGGGA ATGAAGCTTG GGGATTGTTT TAAATCGGGT
TTGCATATTG GTATCGGCTT CGTGGGTATT GGTCTGGTCA TCGGCCTGAT GCTGGATTCT
ATCGGCCCCG CGGCGAAAGC CATGGCGGAA CATTTCCAAA TCAATCTCCA CGTTATTGAC
GTCGGCTGGC CAGGTTCATC GCCCATGACC TGGGCGTCAC AAATCGCGCT GGTCGCGATC
CCTGTCGCCA TCGGGGTTAA CGTCCTGATG CTGGTGACCC GCATGACCCG CGTGGTGAAT
GTTGATATCT GGAATATCTG GCACATGACC TTCACGGGCG CCATGCTGCA TCTGGCGACC
GGTTCATACT GGCTGGGGAT TCTGGGCGTT GTGGTTCATG CCGCCTTTGT CTACAAACTG
GGGGACTGGT TTGCCAAAGA TACCCGCGAC TATTTTGGCC TCGAGGGGAT TGCTATCCCA
CACGGTTCAT CCGCGTACCT GGGCCCCGTG GCGGTACTCG TTGATACCAT TATCGAGAAA
ATTCCGGGTC TCAATCGTAT TCACTTTAGC GCAGACGATG TCCAGAAACG CTTCGGACCG
TTTGGCGAGC CGGTGACTGT CGGCTTCGTG ATGGGGCTGG TGATTGGTGT ACTGGCAGGC
TACGACGCCA AAGCCGTTCT GCAACTGGCG GTCAAAACCG CAGCGGTGAT GCTGCTTATG
CCACGCGTCA TTAAACCTAT TATGGATGGC CTAACGCCTA TCGCGAAACA TGCGCGTAAA
CGTCTACAGG CTAAATTTGG CGGGCAGGAG TTCCTGATAG GCCTTGATCC AGCGCTACTG
CTCGGTCATA CCTCTGTTGT CTCCGCGAGC CTGATATTCA TTCCGCTGAC CATCCTGATT
GCCGTCTTAG TACCAGGGAA CCAGGTGCTG CCGTTCGGCG ACCTCGCCAC CATCGGTTTC
TTTATTGCGA TGGCGGTTGC GGTACACCAG GGCAACCTGT TCCGCACGCT GATTTCAGGT
GTCATTATCA TGGGCATCAC CCTGTGGATA GCCACCCAGA CGATTGGCCT GCATACCCAA
CTGGCTGCCA ATGCCGGAGC GCTAAAAGCT GGCGGACAAG TCGCCTCGCT GGATCAGGGC
GGTTCCCCCA TCACCTGGCT GCTGATTCAA CTTTTTACCT GGCAGAATAT CGTCGGCTTC
GCCGTCATTG CCATTATCTA TCTGGCTGGC GTACTGCTGA CCTGGCGTCG CGCCCGACAG
TTTGTCGCGG CTGAGAAAGC CACGGCGCTA CAGCAAAGTC AAATCGCCTC TTAA
|
|---|
| Protein sequence | MFSEIMRYIL DLGPTVMLPL VIIVFSKLLG MKLGDCFKSG LHIGIGFVGI GLVIGLMLDS
IGPAAKAMAE HFQINLHVID VGWPGSSPMT WASQIALVAI PVAIGVNVLM LVTRMTRVVN
VDIWNIWHMT FTGAMLHLAT GSYWLGILGV VVHAAFVYKL GDWFAKDTRD YFGLEGIAIP
HGSSAYLGPV AVLVDTIIEK IPGLNRIHFS ADDVQKRFGP FGEPVTVGFV MGLVIGVLAG
YDAKAVLQLA VKTAAVMLLM PRVIKPIMDG LTPIAKHARK RLQAKFGGQE FLIGLDPALL
LGHTSVVSAS LIFIPLTILI AVLVPGNQVL PFGDLATIGF FIAMAVAVHQ GNLFRTLISG
VIIMGITLWI ATQTIGLHTQ LAANAGALKA GGQVASLDQG GSPITWLLIQ LFTWQNIVGF
AVIAIIYLAG VLLTWRRARQ FVAAEKATAL QQSQIAS
|
|---|
| |