Gene SNSL254_A3511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3511 
SymbolgarL 
ID6485597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3406142 
End bp3406912 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content55% 
IMG OID642738794 
Productalpha-dehydro-beta-deoxy-D-glucarate aldolase 
Protein accessionYP_002042513 
Protein GI194446040 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID[TIGR03239] 2-dehydro-3-deoxyglucarate aldolase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.804576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACG CTATTTTCCC GAATAAGTTT AAAGCGGCGC TGGCGGCGCA ACAGGTGCAG 
ATTGGCTGCT GGTCTGCACT GGCAAGCCCA ATCACCACCG AAGTTCTTGG TCTGGCGGGA
TTTGACTGGC TGGTGCTGGA TGGCGAACAT GCGCCGAACG ATGTGACCAC CTTAATTCCT
CAGTTAATGG CATTGAAAGG CAGCGCCAGC GCGCCTGTAG TACGTGTGCC AACCAATGAA
CCGGTCATTA TCAAACGGAT GCTGGATATT GGGTTTTATA ACTTCCTGAT CCCCTTTGTT
GAAACGCAAG AGGAAGCGGC TCGCGCCGTC GCCTCGACGC GTTACCCGCC GGAAGGCATT
CGCGGCGTCT CCGTTTCTCA CCGCGCGAAT ATGTTCGGTA CGGTGCCTGA TTACTTTGCG
CAGTCGAACA AAAACATCAC CATTATTGTT CAAATCGAAA GCCAGTTGGG TGTCGACAAT
GTTGATGCCA TCGCCGCAAC GGAAGGCGTT GATGGCATTT TTGTCGGCCC AAGCGATTTG
GCCGCCGCGC TGGGTCATCT CGGCAATGCT TCTCACCCTG ACGTGCAGCA GACGATTCAA
CATATTTTCG CCCGCGCTAA AGCGCACGGT AAACCGTGCG GCATTCTGGC GCCGGTAGAG
GCGGATGCCC GCCGTTATCT GGAATGGGGC GCGACCTTTG TCGCCGTTGG CAGCGATTTA
GGCGCATTCC GCGCCAGCAC GCAGAAGCTT GCCGACACCT TTAAAAAATA A
 
Protein sequence
MNNAIFPNKF KAALAAQQVQ IGCWSALASP ITTEVLGLAG FDWLVLDGEH APNDVTTLIP 
QLMALKGSAS APVVRVPTNE PVIIKRMLDI GFYNFLIPFV ETQEEAARAV ASTRYPPEGI
RGVSVSHRAN MFGTVPDYFA QSNKNITIIV QIESQLGVDN VDAIAATEGV DGIFVGPSDL
AAALGHLGNA SHPDVQQTIQ HIFARAKAHG KPCGILAPVE ADARRYLEWG ATFVAVGSDL
GAFRASTQKL ADTFKK