| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3505 |
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| Symbol | tdcC |
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| ID | 6484728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3399371 |
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| End bp | 3400702 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642738790 |
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| Product | threonine/serine transporter TdcC |
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| Protein accession | YP_002042509 |
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| Protein GI | 194443876 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACTA CTGATAGCAT TGTATCCAGC CAGGCAAAAC AGTCGTCATG GCGTAAATCG
GACACGACGT GGACGCTGGG TTTATTTGGT ACCGCCATTG GCGCCGGGGT GCTGTTTTTC
CCTATCCGCG CCGGGTTTGG CGGGCTTATC CCCATTCTGC TGATGCTGGT TTTAGCTTAC
CCCATTGCGT TCTATTGTCA CCGGGCGCTG GCGCGTCTGT GTTTATCCGG ATCTAATCCG
TCCGGCAATA TTACGGAAAC GGTCGAAGAG CACTTTGGTA AAACGGGCGG GGTAGTTATC
ACGTTCCTTT ACTTCTTTGC GATTTGCCCG CTGCTGTGGA TTTATGGGGT CACCATTACT
AACACGTTCA TGACGTTTTG GGAAAATCAG CTGCAGATGC CAGCGTTGAA TCGCGGTTTC
GTGGCGCTGT TCTTGCTGCT GCTGATGGCC TTTGTGATCT GGTTTGGTAA AGATCTGATG
GTTAAGGTGA TGAGTTACCT GGTATGGCCG TTTATCGCCA GTCTGGTGCT AATCTCATTA
TCGCTGATTC CTTACTGGAA CTCGGCGGTT ATCGATCAGG TTGATCTCAG TAATATCGAG
CTGACCGGGC ACGATGGCAT ACTGGTTACG GTGTGGCTGG GCATCTCTAT CATGGTGTTC
TCCTTTAACT TTTCGCCCAT CGTCTCTTCC TTCGTGGTGT CTAAGCGTGA AGAGCATGAG
AAAGAGTTTG GCCGCGAATT TACCGAGCGT AAATGTTCAC AGATCATCTC GCGCGCCAGT
ATGCTGATGG TCGCCGTGGT GATGTTCTTC GCCTTTAGCT GCCTGTTTAC GCTCTCTCCG
CAGAACATGG CGGATGCGAA AGCGCAGAAC ATTCCGGTAC TTTCCTACCT GGCCAACCAT
TTCGCCTCTT TGTCGGGGAC AAAATCCACT TTTGCAACGG TGCTGGAGTA TGGCGCGTCT
ATCATCGCGC TGGTTGCTAT TTTCAAATCT TTCTTCGGTC ACTACCTGGG GACGCTGGAA
GGGCTGAACG GCCTGGTGCT GAAATTCGGT TATAAAGGCG ATAAAACCAA AGTCTCTATG
GGTAAGCTTA ACACCATCAG CATGATCTTC ATTATGGGGT CTACCTGGGT CGTAGCTTAC
GCAAACCCGA ACATTCTGGA CCTGATTGAA GCGATGGGCG CGCCGATTAT CGCCTCGCTG
TTATGTCTGC TGCCGATGTA CGCCATTCGT AAAGCGCCGT CGCTGGCGAA GTACCGTGGT
CGTCTGGATA ACGTGTTCGT CACCCTGATT GGTCTGCTGA CCATCCTGAA TATTGTCTAC
AAATTGTTCT AA
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| Protein sequence | MSTTDSIVSS QAKQSSWRKS DTTWTLGLFG TAIGAGVLFF PIRAGFGGLI PILLMLVLAY
PIAFYCHRAL ARLCLSGSNP SGNITETVEE HFGKTGGVVI TFLYFFAICP LLWIYGVTIT
NTFMTFWENQ LQMPALNRGF VALFLLLLMA FVIWFGKDLM VKVMSYLVWP FIASLVLISL
SLIPYWNSAV IDQVDLSNIE LTGHDGILVT VWLGISIMVF SFNFSPIVSS FVVSKREEHE
KEFGREFTER KCSQIISRAS MLMVAVVMFF AFSCLFTLSP QNMADAKAQN IPVLSYLANH
FASLSGTKST FATVLEYGAS IIALVAIFKS FFGHYLGTLE GLNGLVLKFG YKGDKTKVSM
GKLNTISMIF IMGSTWVVAY ANPNILDLIE AMGAPIIASL LCLLPMYAIR KAPSLAKYRG
RLDNVFVTLI GLLTILNIVY KLF
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