Gene SNSL254_A3500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3500 
Symbol 
ID6482461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp3391351 
End bp3392661 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content56% 
IMG OID642738785 
Producthypothetical protein 
Protein accessionYP_002042504 
Protein GI194444391 
COG category[S] Function unknown 
COG ID[COG3681] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.173871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAT CTAAAATAAA TCCATTGTGG CAAAGTTTTA TCCTGGCCGT ACAGGAAGAA 
GTAAAACCGG CGCTGGGGTG TACTGAGCCA ATTTCACTGG CGCTGGCGGC AGCGGCGGCG 
GCGGCTGAAC TTGACGGCAC AGTTGAACGC ATTGACGCGT GGGTTTCGCC TAATCTGATG 
AAAAATGGTA TGGGCGTTAC CGTTCCAGGA ACGGGAATGG TAGGGCTACC GATCGCCGCG 
GCGCTTGGCG CGTTGGGCGG TGATGCGAAA GCCGGGTTGG AGGTGCTAAA AGACGCTTCC 
GCTAAAGCCG TTGCCGATGC AAAAGCGATG CTGGCCGCCG GACATGTTGC AGTGATGTTG 
CAGGAGCCAT GTAACGATAT CCTGTTTTCA CGGGCGAAAG TGTATAGCGG CGATAGCTGG 
GCATGTGTCA CGATCGTCGG CGATCATACA AACATTGTGC GGATAGAAAC CGACAAGGGC 
GTGGTATTTA CCCAGGCCGA TAATGCGCAG GAAGAAGAAA AAACCTCGCC ACTGGGAGTG 
CTGTCTCATA CCTCGCTGGA AGAGATCCTG GCGTTTGTGA ATGCGGTGCC CTTTGACGCT 
ATCCGCTTTA TTCTCGATGC GGCCAGGCTA AACGGCGCGT TGTCGCAGGA GGGACTGCGT 
GGTTCCTGGG GGCTGCATAT TGGTTCGACG CTGGCCAAAC AGTGCGATCG CGGTCTGCTG 
GCGAAAGATC TCTCCACGGC GATTTTGATC CGTACCAGCG CGGCGTCAGA CGCCAGAATG 
GGCGGCGCCA CGTTGCCCGC GATGAGCAAC TCCGGCTCCG GCAACCAGGG GATTACCGCC 
ACGGTGCCAG TCATGGTGGT TGCTGAACAT GTCGGCGCCG ATGACGAACG CCTGGCGCGC 
GCGCTAATGT TATCGCATTT GAGCGCTATC TATATTCACC ATCAGCTTCC GCGTTTGTCG 
GCGCTGTGCG CGGCAACTAC GGCGGCGATG GGCGCGGCAG CGGGTATGGC GTGGCTGATA 
GATGGTCGTT ACGACACTAT CGCAATGGCT ATCAGCAGTA TGATTGGTGA TGTCAGCGGG 
ATGATTTGCG ATGGCGCGTC GAATAGCTGC GCGATGAAAG TCTCTACCAG CGCGTCGGCG 
GCGTGGAAAG CCGTACTGAT GGCGTTGGAT GATACGGCGG TGACCGGAAA CGAAGGGATT 
GTGGCGCACA ATGTCGAACA ATCTATTGCG AATTTGTGTT CGCTGGCGTG TCGCTCAATG 
CAGCAGACCG ACAAGCAGAT CATCGAGATT ATGGCCAGTA AAGCGCATTA A
 
Protein sequence
MFESKINPLW QSFILAVQEE VKPALGCTEP ISLALAAAAA AAELDGTVER IDAWVSPNLM 
KNGMGVTVPG TGMVGLPIAA ALGALGGDAK AGLEVLKDAS AKAVADAKAM LAAGHVAVML 
QEPCNDILFS RAKVYSGDSW ACVTIVGDHT NIVRIETDKG VVFTQADNAQ EEEKTSPLGV 
LSHTSLEEIL AFVNAVPFDA IRFILDAARL NGALSQEGLR GSWGLHIGST LAKQCDRGLL 
AKDLSTAILI RTSAASDARM GGATLPAMSN SGSGNQGITA TVPVMVVAEH VGADDERLAR 
ALMLSHLSAI YIHHQLPRLS ALCAATTAAM GAAAGMAWLI DGRYDTIAMA ISSMIGDVSG 
MICDGASNSC AMKVSTSASA AWKAVLMALD DTAVTGNEGI VAHNVEQSIA NLCSLACRSM 
QQTDKQIIEI MASKAH