Gene SNSL254_A3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3479 
SymbolygjG 
ID6483832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3374034 
End bp3375413 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content54% 
IMG OID642738766 
Productputrescine--2-oxoglutarate aminotransferase 
Protein accessionYP_002042485 
Protein GI194445628 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR03372] putrescine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACAGGT TACCTTCCAG CGCATCGGCT TTGGCCTGTA GCGCGCACGC ACTGAATCTC 
ATCGAGAAGC GAACGCTAAA CCATGAGGAA ATGAAAGCAC TAAACCGAGA GGTCATTGAC
TACTTTAAAG AGCATGTAAA TCCAGGATTT CTGGAATACC GGAAATCTGT TACCGCCGGC
GGGGATTACG GAGCCGTAGA GTGGCAAGCG GGCAGTTTGA ATACGCTTGT CGACACCCAG
GGGCAGGAGT TTATCGACTG TCTTGGGGGG TTTGGCATCT TTAACGTGGG GCACCGTAAT
CCTGTTGTGG TATCCGCCGT CCAGAATCAA CTCGCAAAAC AACCTCTCCA CAGCCAGGAG
TTACTTGATC CCTTGCGGGC GATGCTGGCA AAAACGCTGG CGGCGCTGAC ACCGGGGAAA
CTCAAGTACA GCTTTTTCTG TAACAGCGGC ACCGAATCCG TCGAAGCGGC GCTAAAACTG
GCAAAAGCGT ATCAGTCGCC GCGCGGCAAG TTTACCTTTA TCGCCACCAG CGGCGCATTT
CATGGCAAAT CATTGGGCGC GCTCTCCGCC ACGGCCAAAT CCACCTTCCG CAGACCCTTT
ATGCCTTTAC TGCCGGGCTT CCGCCATGTG CCGTTTGGCA ATATCGACGC GATGAGCATG
GCATTTAGCG AAGGCAAAAA AACGGGCGAC GAGATAGCAG CCGTGATTCT GGAGCCTATT
CAGGGTGAAG GCGGCGTGAT CCTGCCGCCG CAGGGATACC TGACAGAGGT ACGTAAGCTC
TGTGACGAAT TCGGCGCGCT GATGATTCTG GATGAAGTAC AAACCGGCAT GGGGCGTACC
GGCAAGATGT TTGCCTGCGA GCACGAAAAT GTGCAGCCTG ATATTCTGTG TCTGGCGAAA
GCCCTGGGCG GCGGCGTGAT GCCGATTGGC GCCACCATCG CGACTGAAGA GGTGTTTTCG
GTTCTGTTCG ACAACCCCTT CCTGCATACC ACCACTTTTG GCGGTAATCC GCTGGCTTGT
GCTGCCGCGC TGGCGACCAT TAACGTCCTG CTGGAACAAA ATCTCCCGGC CCAGGCGGAA
CAAAAAGGCG ATACGCTCCT GGATGGTTTT CGACAACTTG CGCGTGAATA TCCCAATCTG
GTACACGATG CGCGCGGCAA AGGTATGTTG ATGGCCATTG AATTTGTCGA TAACGAAACG
GGCTACCGTT TTGCCAGTGA GATGTTCCGT CAACGCGTGC TGGTCGCTGG TACGCTGAAT
AATGCGAAAA CAATTCGTAT CGAGCCACCG CTCACGCTAA CCATTGAACT GTGCGAACAG
GTATTGAAAT CAGCGCGTAA TGCGCTGGCG GCGATGCAGG TGAGCGTTGA AGAGGTTTAA
 
Protein sequence
MNRLPSSASA LACSAHALNL IEKRTLNHEE MKALNREVID YFKEHVNPGF LEYRKSVTAG 
GDYGAVEWQA GSLNTLVDTQ GQEFIDCLGG FGIFNVGHRN PVVVSAVQNQ LAKQPLHSQE
LLDPLRAMLA KTLAALTPGK LKYSFFCNSG TESVEAALKL AKAYQSPRGK FTFIATSGAF
HGKSLGALSA TAKSTFRRPF MPLLPGFRHV PFGNIDAMSM AFSEGKKTGD EIAAVILEPI
QGEGGVILPP QGYLTEVRKL CDEFGALMIL DEVQTGMGRT GKMFACEHEN VQPDILCLAK
ALGGGVMPIG ATIATEEVFS VLFDNPFLHT TTFGGNPLAC AAALATINVL LEQNLPAQAE
QKGDTLLDGF RQLAREYPNL VHDARGKGML MAIEFVDNET GYRFASEMFR QRVLVAGTLN
NAKTIRIEPP LTLTIELCEQ VLKSARNALA AMQVSVEEV