Gene SNSL254_A3446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3446 
Symbol 
ID6485014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3340262 
End bp3341425 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content52% 
IMG OID642738735 
Productglutathionylspermidine synthase 
Protein accessionYP_002042455 
Protein GI194442687 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0754] Glutathionylspermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGAG TCAGTATTAC CGAGCGCCCG GACTGGCGCG ATAAAGCGAC TGAATACGGG 
TTTAATTTTC ACACTATGTA TGGTGAACCG TACTGGTGTG AAGACGCTTA TTACAAGTTA
ACGCTCGCCC AGGTGGAAAA ACTGGAAGAC GTTACCGCCG AGCTGCACCA GATGTGCCTC
AAGGTAGTAG AACGCGTCAT CGCCAGCGAT GAGCTGATGA CGAAGTTTCG TATTCCAAAA
CATACCTGGG GTTTTGTTCG CCAGTCCTGG CAAACGCAAC AACCGTCGCT CTATTCCCGC
CTCGATCTGG CCTGGGACGG TATCGGCGAG CCTAAGCTGC TCGAAAATAA TGCCGACACG
CCAACATCGC TGTATGAAGC GGCGTTTTTC CAGTGGATTT GGCTGGAAGA TCAGATCAAC
GCGGGCAATC TGCCGGAAGG CAGCGATCAG TTTAATAGCC TGCAGGAAAA GCTGATTGAA
CGCTTTGCTG AACTTCGCGA GCAGTACGGT TTTCAGTTGC TGCATCTCAC CTGCTGTCGC
GATACGGTTG AGGATCGCGG CACCATTCAG TATTTACAGG ATTGCGCGGC CGAAGCGGAA
ATCGCCACCG AATTTCTCTA TATCGACGAT ATTGGTCTGG GGGAAAAAGG CCAATTTACG
GATCTGCAGG ATCAGGTCAT TGCGAACCTG TTCAAGCTCT ATCCGTGGGA ATTTATGCTG
CGCGAGATGT TTTCCACCAA GCTGGAAGAT GCCGGCGTGC GCTGGCTGGA ACCGGCCTGG
AAAAGCATTA TCTCCAATAA AGCGTTGTTG CCGCTGTTGT GGGAGATGTT CCCGGACCAT
CCGAATCTGT TGCCTGCGTA TTTCGCCGAA GACGAACATC CGCCAATGGA TAAATATGTC
GTGAAACCGA TCTTCTCCCG CGAAGGGGCG AACGTATCGA TTATTGAGAA CGGTAAAACG
ATCGAATCCG TGGAAGGCCC GTATGGCGAA GAGGGTATGA TCGTGCAACA GTTCTATCCG
CTGCCAAAAT TCGGCGACAG TTACACCCTG ATTGGTAGCT GGCTGATTAA CGATCAGCCC
GCCGGAATTG GTATCCGTGA AGATCGGGCG CTGATCACCC AGGATCTCTC CCGCTTCTAT
CCGCATATTT TTGTCGAAGG ATAG
 
Protein sequence
MERVSITERP DWRDKATEYG FNFHTMYGEP YWCEDAYYKL TLAQVEKLED VTAELHQMCL 
KVVERVIASD ELMTKFRIPK HTWGFVRQSW QTQQPSLYSR LDLAWDGIGE PKLLENNADT
PTSLYEAAFF QWIWLEDQIN AGNLPEGSDQ FNSLQEKLIE RFAELREQYG FQLLHLTCCR
DTVEDRGTIQ YLQDCAAEAE IATEFLYIDD IGLGEKGQFT DLQDQVIANL FKLYPWEFML
REMFSTKLED AGVRWLEPAW KSIISNKALL PLLWEMFPDH PNLLPAYFAE DEHPPMDKYV
VKPIFSREGA NVSIIENGKT IESVEGPYGE EGMIVQQFYP LPKFGDSYTL IGSWLINDQP
AGIGIREDRA LITQDLSRFY PHIFVEG