Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3430 |
Symbol | parC |
ID | 6485551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3326277 |
End bp | 3328535 |
Gene Length | 2259 bp |
Protein Length | 752 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642738719 |
Product | DNA topoisomerase IV subunit A |
Protein accession | YP_002042439 |
Protein GI | 194446354 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATA TGGCAGAGCG CCTTGCGCTA CATGAATTTA CGGAAAACGC CTACTTAAAC TACTCCATGT ACGTGATCAT GGATCGTGCG TTGCCGTTTA TTGGCGACGG CCTGAAGCCG GTACAGCGCC GCATCGTCTA TGCGATGTCA GAGCTGGGGC TGAACGCCAG CGCTAAATTT AAAAAATCCG CCCGTACCGT CGGTGACGTA CTGGGTAAGT ATCATCCGCA CGGCGACAGC GCCTGCTATG AAGCCATGGT GCTGATGGCG CAGCCGTTCT CTTACCGTTA CCCGCTGGTC GATGGCCAGG GAAACTGGGG CGCGCCGGAT GATCCGAAGT CATTCGCGGC AATGCGTTAT ACCGAATCTC GCCTGTCCAA ATATGCCGAG CTGCTGTTAA GCGAACTCGG CCAGGGGACG GCGGACTGGG TGCCAAACTT CGACGGCACG ATGCAGGAAC CGAAAATGTT ACCGGCGCGT CTGCCGAACA TCCTGCTGAA CGGCACCACC GGTATAGCGG TGGGGATGGC AACAGATATC CCGCCGCACA ACCTGCGCGA AGTGGCGAAA GCGGCGATTA CGCTGATTGA GCAGCCGAAA ACGACGCTGG ATCAGTTGCT GGATATCGTC CAGGGGCCGG ATTACCCGAC CGAAGCGGAG ATCATTACCC CACGTGCGGA AATTCGTAAA ATTTACGAAA ACGGGCGGGG CTCCGTGCGT ATGCGCGCGG TATGGACCAA AGAAGACGGC GCTGTGGTAA TTTCCGCGCT GCCGCATCAG GTCTCTGGCG CGAAAGTGCT GGAGCAGATT GCTGCGCAGA TGCGTAATAA AAAACTGCCG ATGGTGGACG ATCTGCGCGA TGAATCGGAT CACGAAAACC CGACGCGTTT AGTGATTGTG CCACGCTCCA ACCGTGTGGA TATGGAACAG GTGATGAACC ATCTGTTCGC CACCACCGAT CTGGAAAAAA GCTACCGTAT TAACCTGAAC ATGATCGGTC TGGATGGTCG TCCGGCGGTG AAAAACCTGC TGGAGATCCT CACCGAGTGG CTGGCGTTCC GCCGCGACAC GGTGCGCCGT CGTCTGAACT ATCGTCTGGA GAAAGTGCTT AAGCGCCTGC ATATCCTCGA AGGTTTGCTG GTGGCGTTTC TCAACATCGA TGAAGTGATC GAGATTATCC GTAACGAGGA TGAGCCGAAA CCCGCGCTGA TGTCGCGTTT CGGCATCAGC GAAACCCAGG CGGAAGCGAT TCTCGAACTG AAACTGCGCC ATCTCGCCAA ACTGGAAGAG ATGAAAATTC GCGGCGAGCA GGACGAGCTG GAAAAAGAGC GTGACCAGTT GCAGGGCATT CTCGCGTCCG AACGCAAAAT GAATACCTTG CTGAAAAAAG AGCTACAGGC AGATTCCGAC GCCTATGGCG ACGATCGCCG TTCTCCGCTG CGTGAGCGCG AAGAAGCTAA AGCGATGAGC GAACACGACA TGCTGCCGTC CGAACCGGTG ACTATCGTGC TGTCGCAGAT GGGCTGGGTG CGCAGCGCCA AAGGTCATGA TATTGATGCG CCGGGGCTTA ACTATAAAGC AGGCGACAGC TTTAAAGCCG CGGTGAAAGG TAAGAGCAAT CAACCGGTGG TGTTTATTGA TACCACCGGG CGCAGCTATG CTATTGATCC CATTACGCTT CCGTCGGCGC GTGGGCAGGG CGAGCCGCTG ACCGGCAAAC TCACGCTGCC GCCGGGGGCG ACCGTAGAGC ATATGCTGAT GGAAGGCGAT GACCAGAAAC TGCTGATGGC GTCGGATGCG GGCTACGGCT TCGTTTGTAC GTTTAACGAT CTGGTTGCCC GTAACCGTGC CGGTAAGGCG TTGATTACAC TGCCGGAAAA TGCGCACGTC ATGCCGCCGC TGGTGATTGA AGACGAGCAC GATATGCTGC TGGCGATTAC CCAGGCCGGA CGGATGTTGA TGTTCCCGGT AGACTCTCTG CCGCAGCTGT CGAAAGGCAA AGGGAATAAG ATTATTAATA TCCCCTCTGC GGAAGCGGCG AAAGGCGATG ATGGACTGGC GCACCTGTAC GTGCTGCCGC CACAAAGCAC TCTGACTATC CATGTCGGGA AGCGCAAAAT CAAACTGCGC CCTGAAGAGT TACAGAAGGT GGTCGGCGAA CGCGGACGCC GTGGCACATT AATGCGCGGC CTGCAGCGTA TCGATCGCAT TGAGATTGAT TCACCGCATC GTGTAAGTCA TGGCGACAGC GAAGAGTAA
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Protein sequence | MSDMAERLAL HEFTENAYLN YSMYVIMDRA LPFIGDGLKP VQRRIVYAMS ELGLNASAKF KKSARTVGDV LGKYHPHGDS ACYEAMVLMA QPFSYRYPLV DGQGNWGAPD DPKSFAAMRY TESRLSKYAE LLLSELGQGT ADWVPNFDGT MQEPKMLPAR LPNILLNGTT GIAVGMATDI PPHNLREVAK AAITLIEQPK TTLDQLLDIV QGPDYPTEAE IITPRAEIRK IYENGRGSVR MRAVWTKEDG AVVISALPHQ VSGAKVLEQI AAQMRNKKLP MVDDLRDESD HENPTRLVIV PRSNRVDMEQ VMNHLFATTD LEKSYRINLN MIGLDGRPAV KNLLEILTEW LAFRRDTVRR RLNYRLEKVL KRLHILEGLL VAFLNIDEVI EIIRNEDEPK PALMSRFGIS ETQAEAILEL KLRHLAKLEE MKIRGEQDEL EKERDQLQGI LASERKMNTL LKKELQADSD AYGDDRRSPL REREEAKAMS EHDMLPSEPV TIVLSQMGWV RSAKGHDIDA PGLNYKAGDS FKAAVKGKSN QPVVFIDTTG RSYAIDPITL PSARGQGEPL TGKLTLPPGA TVEHMLMEGD DQKLLMASDA GYGFVCTFND LVARNRAGKA LITLPENAHV MPPLVIEDEH DMLLAITQAG RMLMFPVDSL PQLSKGKGNK IINIPSAEAA KGDDGLAHLY VLPPQSTLTI HVGKRKIKLR PEELQKVVGE RGRRGTLMRG LQRIDRIEID SPHRVSHGDS EE
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