Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3428 |
Symbol | |
ID | 6484213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3323797 |
End bp | 3325209 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642738717 |
Product | repressor protein for FtsI |
Protein accession | YP_002042437 |
Protein GI | 194444971 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2132] Putative multicopper oxidases |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTCA GTCGGCGTCA GTTTCTTCAG GCATCGGGAA TCGCACTATG TGCAGGCGCG ATTCCCCTCA GGGCGAATGC TGCCGGTCAG CAACAGCCGT TGCCTGTTCC GCCGTTGCTG GAGTCCCGTC GCGGGCAGCC GTTGTTTATG ACGCTACAGC GAGCGCACTG GTCCTTTACG CAAGGCACGC GCGCGCCGGT CTGGGGAGTG AACGGTCGTT ATCTGGGGCC GACAATCCGC GTCTGGAAAG GCGATGACGT TAAACTCATC TATAGCAACC GCCTGGCGGA AAATGTCTCC ATGACGGTTG CTGGTTTACT GGTGCCGGGG CCGCTGATGG GTGGCCCGGC GCGTATGATG TCGCCGAACG CGGACTGGGC GCCGGTGCTG CCGATTCGTC AGAGCGCCGC CACGCTGTGG TATCACGCTA ACACGCCTAA CCGCACTGCG CAGCAGGTGT ATAACGGCCT GGCAGGAATG TGGCTGGTCG AAGACGACAT CAGTAAAACG CTGCCCATTC CGAACCATTA CGGCGTGGAT GATTTTCCCG TCATTATCCA GGATAAACGG CTGGATAACT TTGGGACGCC GGAGTACAGC GAACCGGGAA GCGGTGGTTT TGTCGGCGAT ACGCTGCTGG TGAACGGCGC GCAAAGCCCC TATGTCGAAG TGTCCCGCGG CTGGGTGCGG TTACGGTTGT TGAACGCCTC GAACTCGCGG CGCTATCAGC TTCAGATGAG CGATGGCCGG GCGCTGCATG TGATTTCAAG CGATCAGGGC TTTTTACCTG CGCCGGTTTC CGTCAAACAG TTGTCACTGG CGCCCGGCGA GCGACGTGAA ATCCTGGTTG ATATGACCAA CGGCGACGAA GTCTCGATCA CCTGCGGGGA AGCGGCCAGC ATAGTCGATC GGATTCGCGG TTTCTTTGAG CCTTCCAGTA TTCTGGTTTC TACCCTGGTG CTGACGTTAC GGCCAACCGG ATTGCTGCCG CTGGTGACCG ATAATCTGCC GATGCGTCTG TTGCCGACGG AGATCATGAG CGGCGCGCCT GTCCGCAGTC GGGACATCAG TCTTGGCGAC GATCCGGGGA TTAACGGCCA ACTGTGGGAT GTGAATCGCA TTGATATTAC CGCCCAACAA GGCACCTGGG AGCGCTGGAC GGTACGCGCC GATATGCCGC AGTCGTTCCA TATTGAGGGC GTCTCTTTCC TGATTCGTAA CGTCAACGGC GCTATGCCGT TCCCGGAAGA TAGAGGCTGG AAAGATACCG TCTGGGTGGA TGGGCAAGTC GAATTGCTGG TCTATTACGG TCAGCCGTCC TGGCCGCACT TCCCGTTCTA TTTCAACAGC CAGACGCTGG AAATGGCTGA CCGCGGCTCG ATTGGGCAAA TGCTGGTGAA TCCGGCGTCG TAA
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Protein sequence | MSFSRRQFLQ ASGIALCAGA IPLRANAAGQ QQPLPVPPLL ESRRGQPLFM TLQRAHWSFT QGTRAPVWGV NGRYLGPTIR VWKGDDVKLI YSNRLAENVS MTVAGLLVPG PLMGGPARMM SPNADWAPVL PIRQSAATLW YHANTPNRTA QQVYNGLAGM WLVEDDISKT LPIPNHYGVD DFPVIIQDKR LDNFGTPEYS EPGSGGFVGD TLLVNGAQSP YVEVSRGWVR LRLLNASNSR RYQLQMSDGR ALHVISSDQG FLPAPVSVKQ LSLAPGERRE ILVDMTNGDE VSITCGEAAS IVDRIRGFFE PSSILVSTLV LTLRPTGLLP LVTDNLPMRL LPTEIMSGAP VRSRDISLGD DPGINGQLWD VNRIDITAQQ GTWERWTVRA DMPQSFHIEG VSFLIRNVNG AMPFPEDRGW KDTVWVDGQV ELLVYYGQPS WPHFPFYFNS QTLEMADRGS IGQMLVNPAS
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