Gene SNSL254_A3426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3426 
Symbol 
ID6486551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3321952 
End bp3322434 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content47% 
IMG OID642738715 
Producttripartite ATP-independent periplasmic 
Protein accessionYP_002042435 
Protein GI194443527 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATAC TCACCAATGC ACTGAACAAA ATACTGGCCG GGTGCTGCTG TATTATTCTG 
GCGGTCATGG TTGCCTGCGT ATCCTGGCAG GTGGCGGCGC GCTTTATATT CAACGCGCCA
AGCAGCACGC TCGACGAATT CACCCAGATT CTTTTTATGT GGATGATTCT GTTAGGCGGC
GTCTATACCG CCGGATTAAA AAAACATTTA GCTATCGATT TGTTAGCGCA AAAACTCTCC
CGAACGCCCG CCCTCATGCT CGACAGTATC ATTCAGGTGA TTATTACCGT GTTCGCGCTG
ATTTTTATGG TGTACGGCGG TGATATTATT GTTGAAAAAG CGGCGCACGT CAGCCAAATG
TCCCCGGTAT TAAAATGGCC TATGGATAAA GTCTATTGGG TCATGCCGAT TAGCGGCGTC
ATCCTGGTGT ACTACACCAT TGTGAACGTT ATTGATAATT ATCATCAGCG CCATCTTCGC
TAA
 
Protein sequence
MRILTNALNK ILAGCCCIIL AVMVACVSWQ VAARFIFNAP SSTLDEFTQI LFMWMILLGG 
VYTAGLKKHL AIDLLAQKLS RTPALMLDSI IQVIITVFAL IFMVYGGDII VEKAAHVSQM
SPVLKWPMDK VYWVMPISGV ILVYYTIVNV IDNYHQRHLR