Gene SNSL254_A3416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3416 
Symbol 
ID6484866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3311652 
End bp3312311 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content53% 
IMG OID642738707 
Producthypothetical protein 
Protein accessionYP_002042427 
Protein GI194444168 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTCA TTCAAGATAT TATCGCTGCG CTCTGGCAAC ATGATTTTGC CGCGCTGGCG 
AATCCACACG TTGTTAGCGT CGTCTACTTT GTCATGTTCG CCACGCTATT TTTAGAAAAC
GGTCTGCTGC CAGCATCATT CTTACCTGGC GATAGTCTGC TGCTACTGGC AGGCGCGTTG
ATCGCCCAGG ATGTGATGCA TTTTTTGCCG ACAATTGGCA TTCTCACCAC CGCGGCCAGT
CTCGGCTGCT GGCTAAGTTA TATCCAGGGA CGCTGGCTCG GTAATACGCG TACCGTCAAA
GGCTGGCTGG CGCAGCTTCC GGCAAAATAT CATCAGCGCG CCACCTGCAT GTTTGACCGT
CACGGTTTGT TAGCGTTGCT TGCCGGGCGC TTTCTGGCGT TTGTCCGCAC TCTGCTGCCA
ACAATGGCGG GTATTTCCGG CCTGTCCAAC CGCCGGTTTC AGTTTTTTAA CTGGTTAAGC
GGCCTGCTGT GGGTGACTGT CGTGACCAGC TTCGGCTACG CGCTCAGTAT GATCCCGTTT
GTTAAGCGCC ATGAAGACCA GGTAATGACA TTTTTAATGA TCCTTCCCGT CGCGCTACTG
GTCGCCGGGC TGTTAGGTAC GCTGGTCGTG GTGATTAAAA AGAAATACTG TAACGCCTGA
 
Protein sequence
MAVIQDIIAA LWQHDFAALA NPHVVSVVYF VMFATLFLEN GLLPASFLPG DSLLLLAGAL 
IAQDVMHFLP TIGILTTAAS LGCWLSYIQG RWLGNTRTVK GWLAQLPAKY HQRATCMFDR
HGLLALLAGR FLAFVRTLLP TMAGISGLSN RRFQFFNWLS GLLWVTVVTS FGYALSMIPF
VKRHEDQVMT FLMILPVALL VAGLLGTLVV VIKKKYCNA