| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3415 |
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| Symbol | metC |
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| ID | 6484792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3310325 |
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| End bp | 3311512 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642738706 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_002042426 |
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| Protein GI | 194444836 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGATA AACAGTTGGA TACCAAACTG GTAAACGCAG GACGCAGCAA AAAATACACG
CTTGGCTCAG TGAATAGTGT GATTCAACGC GCTTCTTCAC TGGTGTTTGA CACCGTCGAG
GCCAAAAAAC ACGCTACCCG CAATCTCGCC AACGGCGAAT TATTTTACGG ACGCCGGGGA
ACGCTGACCC ACTTTTCGCT CCAGGAAGCC ATGTGTGAAC TGGAAGGCGG CGCCGGATGC
GCGCTCTTCC CGTGCGGCGC GGCGGCGGTC GCCAACACCA TTCTGGCATT CGTTGAGCAG
GGCGACCACA TCCTGATGAC CAACACAGCT TATGAACCCA GCCAGGATTT CTGCAGCAAA
ATTCTCGGCA AACTGGGCGT GACGACAAGC TGGTTCGACC CGCTCATCGG CGCTGATATC
ACGCAACATA TTCAGCCGAA CACGAAAGTC ATATTTCTGG AATCCCCCGG TTCTATTACC
ATGGAAGTAC ATGATATTCC GAGCATTGTT AGTGCGGTCA GACGCGTCGC GCCAGAAGCC
GTCATCATGA TTGATAATAC CTGGGCGGCT GGCGTTCTGT TCAAAGCTCT GGAATTCGAT
ATTGATATCT CTATCCAGGC GGGCACTAAG TATCTGATTG GTCATTCTGA TGCGATGGTC
GGGACTGCCG TTGCAAATGC GCGCTGCTGG GAACAATTGC GGGAAAACGC CTATCTGATG
GGGCAAATGC TCGACGCCGA CACGGCTTAT ATGACCAGCC GCGGTCTGCG CACACTCGGT
GTCCGACTGC GCCAGCATCA AGAAAGCAGC CTCAAAATCG CCGCATGGCT GGCGAACCAT
CCTCAGGTCG CGCGCGTTAA TCATCCGGCC CTGCCGGGTA GCAAAGGTCA TGCGTTCTGG
AAACGAGACT TTACAGGTAG CAGCGGCCTG TTCTCCTTTG TGCTCAATAA AAAGCTGACC
GAGGCAGAAT TATCAGCCTA TCTGGATAAC TTTTCGCTGT TCAGTATGGC CTACTCCTGG
GGAGGCTACG AATCGCTGAT TATTGCTAAT CAGCCGGAAC AGATCGCCGC GATTCGTCCC
GCAGGCGGCG TAGATTTTAC CGGTACGCTG GTTCGGGTGC ATATTGGTTT AGAGAGTGTT
GATGATTTGA TCGCTGATTT AGCCGCCGGC TTCGCCAGAA TTGTGTAA
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| Protein sequence | MTDKQLDTKL VNAGRSKKYT LGSVNSVIQR ASSLVFDTVE AKKHATRNLA NGELFYGRRG
TLTHFSLQEA MCELEGGAGC ALFPCGAAAV ANTILAFVEQ GDHILMTNTA YEPSQDFCSK
ILGKLGVTTS WFDPLIGADI TQHIQPNTKV IFLESPGSIT MEVHDIPSIV SAVRRVAPEA
VIMIDNTWAA GVLFKALEFD IDISIQAGTK YLIGHSDAMV GTAVANARCW EQLRENAYLM
GQMLDADTAY MTSRGLRTLG VRLRQHQESS LKIAAWLANH PQVARVNHPA LPGSKGHAFW
KRDFTGSSGL FSFVLNKKLT EAELSAYLDN FSLFSMAYSW GGYESLIIAN QPEQIAAIRP
AGGVDFTGTL VRVHIGLESV DDLIADLAAG FARIV
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