Gene SNSL254_A3397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3397 
SymbolhypA 
ID6485667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3296809 
End bp3297150 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content56% 
IMG OID642738688 
Producthydrogenase nickel incorporation protein HybF 
Protein accessionYP_002042408 
Protein GI194446262 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAGC TGTCTCTTTG CCAAAGCGCC GTTGAAATTA TTCAGCAGCA GGCAGAACAG 
CACGGCGTGG CGCGCGTCAC CGGCGTATGG CTGGAGATAG GCGCGCTTTC GTGCGTTGAA
GAGCGCGCGG TTCGTTTCAG TTTTGATATC GCCTGCCAGG GGACTTTAGC GCAAGGGTGC
GAATTGCACA TCGACTACAG ACCGGCCCAG GCCTGGTGCT GGGATTGCAG TCAGGTGGTG
GAAATTCTCA GGCATGACGC GCAATGTCCG CGTTGTCATG GCGATCGCCT GCGGGTGGAT
ACCGGCGATT CGTTGAAAGT AAAGAGTATT GAGGTCGAAT AA
 
Protein sequence
MHELSLCQSA VEIIQQQAEQ HGVARVTGVW LEIGALSCVE ERAVRFSFDI ACQGTLAQGC 
ELHIDYRPAQ AWCWDCSQVV EILRHDAQCP RCHGDRLRVD TGDSLKVKSI EVE