Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3392 |
Symbol | |
ID | 6482251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3291678 |
End bp | 3293534 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642738683 |
Product | bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase |
Protein accession | YP_002042403 |
Protein GI | 194444281 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0754] Glutathionylspermidine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.560331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAG GAACCACCAG TCAGGATGCC CCCTTCGGGA CATTATTGGG TTACGCCCCC GGCGGCGTAG CGATCTACTC TTCAGATTAC AATTCCCTCG ATCCGTGGGA CGACGACGAC GCAGCTTTTC GTAGCTACAT CGACGATGAA TACATGGGGC ATAAATGGCA GTGCGTGGAA TTTGCCCGCC GTTTTCTCTT TCTGAATTAT GGCGTTGTTT TTACTGACGT CGGCATGGCC TGGGAAATCT TCTCGCTGCG TTTTCTGCGC GAGGTCGTGA ATGACAATAT TTTGCCTTTG CAGGCCTTCC CGAACGGTTC GCCGCGCGCG CCGGAGGCCG GGGCGCTGCT CATCTGGCAA AAGGGCGGCG AGTTTAACGA AACCGGGCAC GTTGCGATTA TCACCCAGCT CCTGGATAAC AAAATTCGTA TTGCTGAGCA AAACGTTATC CACACGCCAT TGCCGCCAGG GCAGCAGTGG ACTCGCGAAC TGGAAATGGT TGTAGAAAAC GGGTGTTACA CCCTGCGCGA CACCTTTGAT GACACGACGA TTTTAGGCTG GATGATCCAG ACCGACGACA CGCAATACAG TTTGTCACAG CCTGACATCG CGAATCAGTC GCTGGCGATT CGCGGCGCAA GACTGCCAGA GAAAGGTCAG TTTGACGGTC CGTGGCTGGA TGAGCGCGAT CCGTTACAAA AAGCCTATGT GCAGGCGAAC GGACACGTTA TCAATCAGGA CCCGTACCAG TATTTTACCA TCACCGAGAG CGCTGAACAG GAGCTTATCA AAGCGACCAA TGAGTTGCAT TTGATGTACC TGCACGCCAC GGACAAAGTT TTAAAAGACG ATAATCTGCT GGCGCTATTC GATATCCCCA AAATTCTTTG GCCGCGCCTG CGCCTCTCCT GGCAGCGCCG TCGTCACCAT ATGATCACTG GTCGTATGGA TTTCTGCATG GATGAACGCG GGCTGAAAGT CTATGAATAC AATGCCGATT CCGCATCATG CCATACCGAA GCGGGATTAA TTCTCGAAAA ATGGGCTGAG CAGGGCTATA CCGGTAAAGG GCATAACCCG GCAGAGGGCT TAATTAACGA GCTGGCAGGC GCCTGGAAAC ACAGTAAAGC GCGTCCTTTC GTCCATATCA TGCAGGATGA TGATATCGAG GAGGACTATC ACGCGCAGTT TATGCAGCAG GCGCTGCATC AGGCCGGCTT CGCGAGCAAA ATCCTCCGCG GGCTGGGCGA GTTGCGCTGG GATGACGCCG GGCAGTTGAT CGATGGCGAC GGACGGCTGG TGAATTGTGT CTGGAAAACC TGGGCGTGGG AAACGGCGAT GGAGCAGATA CGCGAAGTCA GCGAGACGGA GTATGCCGCA GTGCCTATTC GTACCGGGCA CCCGGAAAAT GAAGTCCGGC TGATTGATGT ATTACTGCGC CCGGAAGTGT TGGTGTTTGA ACCGCTGTGG ACGGTGATCC CGGGTAACAA AGCGATCCTG CCCATCCTGT GGTCGCTCTT CCCGCATCAT CGCTATTTGC TCGACACGGA TTTTACCGTT AACGATGAGC TGGTGCAGAC CGGCTATGCG GTAAAACCGA TTGCCGGACG TTGCGGTAGT AATATTGATT TGGTGAGCCA TCAGGAAGAG CTCCTGGATA AAACCAGCGG CAAGTTCGCC ACGCAGAAAA ATATCTATCA GCAGTTGTGG TGCCTGCCAA AGGTCGCCGG GAAGTATATT CAGGTCTGTA CGTTTACCGT GGGCGGTAAC TACGGCGGTA CGTGCCTGCG CGGCGATGAT TCATTAGTCA TTAAAAAAGA GAGCGATATT GAACCGTTAA TCGTCATCAA AGCGTAA
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Protein sequence | MSKGTTSQDA PFGTLLGYAP GGVAIYSSDY NSLDPWDDDD AAFRSYIDDE YMGHKWQCVE FARRFLFLNY GVVFTDVGMA WEIFSLRFLR EVVNDNILPL QAFPNGSPRA PEAGALLIWQ KGGEFNETGH VAIITQLLDN KIRIAEQNVI HTPLPPGQQW TRELEMVVEN GCYTLRDTFD DTTILGWMIQ TDDTQYSLSQ PDIANQSLAI RGARLPEKGQ FDGPWLDERD PLQKAYVQAN GHVINQDPYQ YFTITESAEQ ELIKATNELH LMYLHATDKV LKDDNLLALF DIPKILWPRL RLSWQRRRHH MITGRMDFCM DERGLKVYEY NADSASCHTE AGLILEKWAE QGYTGKGHNP AEGLINELAG AWKHSKARPF VHIMQDDDIE EDYHAQFMQQ ALHQAGFASK ILRGLGELRW DDAGQLIDGD GRLVNCVWKT WAWETAMEQI REVSETEYAA VPIRTGHPEN EVRLIDVLLR PEVLVFEPLW TVIPGNKAIL PILWSLFPHH RYLLDTDFTV NDELVQTGYA VKPIAGRCGS NIDLVSHQEE LLDKTSGKFA TQKNIYQQLW CLPKVAGKYI QVCTFTVGGN YGGTCLRGDD SLVIKKESDI EPLIVIKA
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