Gene SNSL254_A3392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3392 
Symbol 
ID6482251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3291678 
End bp3293534 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content53% 
IMG OID642738683 
Productbifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase 
Protein accessionYP_002042403 
Protein GI194444281 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0754] Glutathionylspermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.560331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAG GAACCACCAG TCAGGATGCC CCCTTCGGGA CATTATTGGG TTACGCCCCC 
GGCGGCGTAG CGATCTACTC TTCAGATTAC AATTCCCTCG ATCCGTGGGA CGACGACGAC
GCAGCTTTTC GTAGCTACAT CGACGATGAA TACATGGGGC ATAAATGGCA GTGCGTGGAA
TTTGCCCGCC GTTTTCTCTT TCTGAATTAT GGCGTTGTTT TTACTGACGT CGGCATGGCC
TGGGAAATCT TCTCGCTGCG TTTTCTGCGC GAGGTCGTGA ATGACAATAT TTTGCCTTTG
CAGGCCTTCC CGAACGGTTC GCCGCGCGCG CCGGAGGCCG GGGCGCTGCT CATCTGGCAA
AAGGGCGGCG AGTTTAACGA AACCGGGCAC GTTGCGATTA TCACCCAGCT CCTGGATAAC
AAAATTCGTA TTGCTGAGCA AAACGTTATC CACACGCCAT TGCCGCCAGG GCAGCAGTGG
ACTCGCGAAC TGGAAATGGT TGTAGAAAAC GGGTGTTACA CCCTGCGCGA CACCTTTGAT
GACACGACGA TTTTAGGCTG GATGATCCAG ACCGACGACA CGCAATACAG TTTGTCACAG
CCTGACATCG CGAATCAGTC GCTGGCGATT CGCGGCGCAA GACTGCCAGA GAAAGGTCAG
TTTGACGGTC CGTGGCTGGA TGAGCGCGAT CCGTTACAAA AAGCCTATGT GCAGGCGAAC
GGACACGTTA TCAATCAGGA CCCGTACCAG TATTTTACCA TCACCGAGAG CGCTGAACAG
GAGCTTATCA AAGCGACCAA TGAGTTGCAT TTGATGTACC TGCACGCCAC GGACAAAGTT
TTAAAAGACG ATAATCTGCT GGCGCTATTC GATATCCCCA AAATTCTTTG GCCGCGCCTG
CGCCTCTCCT GGCAGCGCCG TCGTCACCAT ATGATCACTG GTCGTATGGA TTTCTGCATG
GATGAACGCG GGCTGAAAGT CTATGAATAC AATGCCGATT CCGCATCATG CCATACCGAA
GCGGGATTAA TTCTCGAAAA ATGGGCTGAG CAGGGCTATA CCGGTAAAGG GCATAACCCG
GCAGAGGGCT TAATTAACGA GCTGGCAGGC GCCTGGAAAC ACAGTAAAGC GCGTCCTTTC
GTCCATATCA TGCAGGATGA TGATATCGAG GAGGACTATC ACGCGCAGTT TATGCAGCAG
GCGCTGCATC AGGCCGGCTT CGCGAGCAAA ATCCTCCGCG GGCTGGGCGA GTTGCGCTGG
GATGACGCCG GGCAGTTGAT CGATGGCGAC GGACGGCTGG TGAATTGTGT CTGGAAAACC
TGGGCGTGGG AAACGGCGAT GGAGCAGATA CGCGAAGTCA GCGAGACGGA GTATGCCGCA
GTGCCTATTC GTACCGGGCA CCCGGAAAAT GAAGTCCGGC TGATTGATGT ATTACTGCGC
CCGGAAGTGT TGGTGTTTGA ACCGCTGTGG ACGGTGATCC CGGGTAACAA AGCGATCCTG
CCCATCCTGT GGTCGCTCTT CCCGCATCAT CGCTATTTGC TCGACACGGA TTTTACCGTT
AACGATGAGC TGGTGCAGAC CGGCTATGCG GTAAAACCGA TTGCCGGACG TTGCGGTAGT
AATATTGATT TGGTGAGCCA TCAGGAAGAG CTCCTGGATA AAACCAGCGG CAAGTTCGCC
ACGCAGAAAA ATATCTATCA GCAGTTGTGG TGCCTGCCAA AGGTCGCCGG GAAGTATATT
CAGGTCTGTA CGTTTACCGT GGGCGGTAAC TACGGCGGTA CGTGCCTGCG CGGCGATGAT
TCATTAGTCA TTAAAAAAGA GAGCGATATT GAACCGTTAA TCGTCATCAA AGCGTAA
 
Protein sequence
MSKGTTSQDA PFGTLLGYAP GGVAIYSSDY NSLDPWDDDD AAFRSYIDDE YMGHKWQCVE 
FARRFLFLNY GVVFTDVGMA WEIFSLRFLR EVVNDNILPL QAFPNGSPRA PEAGALLIWQ
KGGEFNETGH VAIITQLLDN KIRIAEQNVI HTPLPPGQQW TRELEMVVEN GCYTLRDTFD
DTTILGWMIQ TDDTQYSLSQ PDIANQSLAI RGARLPEKGQ FDGPWLDERD PLQKAYVQAN
GHVINQDPYQ YFTITESAEQ ELIKATNELH LMYLHATDKV LKDDNLLALF DIPKILWPRL
RLSWQRRRHH MITGRMDFCM DERGLKVYEY NADSASCHTE AGLILEKWAE QGYTGKGHNP
AEGLINELAG AWKHSKARPF VHIMQDDDIE EDYHAQFMQQ ALHQAGFASK ILRGLGELRW
DDAGQLIDGD GRLVNCVWKT WAWETAMEQI REVSETEYAA VPIRTGHPEN EVRLIDVLLR
PEVLVFEPLW TVIPGNKAIL PILWSLFPHH RYLLDTDFTV NDELVQTGYA VKPIAGRCGS
NIDLVSHQEE LLDKTSGKFA TQKNIYQQLW CLPKVAGKYI QVCTFTVGGN YGGTCLRGDD
SLVIKKESDI EPLIVIKA