Gene SNSL254_A3385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3385 
Symbol 
ID6483812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3282479 
End bp3283357 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content44% 
IMG OID642738676 
Productputative amidohydrolase 
Protein accessionYP_002042396 
Protein GI194444493 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.573055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGTA ATTTTACTGT TTCAGCCTGT CAGTATATTG TTACTGAAAT AAACACTTTT 
GAAGATTTCA TAACAAAGGT AAGGATACTT CTTAATAAAA GTCAGGGAGC TGATGTCGTT
ATCTTCCCGG AGCTATTTAC CATTGAGCTA TTTACACTAT TGAAAAAATG GCAAGAAAGA
CCCATTTCAC ACCTTACTTT AATTGATCAG TTCACGGATG CCTATAAGCA GCTTTTTCAA
CAGGAAGCTA AAGAAAGAGG ACAGTTCATT ATTGCTGGCT CTCATCTGGA GCAGACCGGA
GCAGATCGCT ATGAGAATGT TGCGCATATA TGGGGACCCG ACGGCGAACA TTATGCTCAT
AGTAAGACGC ATATCTTCCC GGCTGAACGG GGTTGGTATA CTCAGGAAGG CGATAAAATG
GCTGTTTTTC AACTGCCATT TGCAAAGGTG GGTTTTAATA TTTGTTATGA AGCAGAAATA
CCGGAGTGTG CCGCGACGCT GGCGGAACAG GGTGCGGAGT TAATTTTAAC GCCTTCCGCT
ACGTTTACTG AACAGGGATT TTGGCGAGTC AGACATTGTT GCCACGCACG TTGTATTGAA
AATCAAATTT ATCTTGTTCA CTGTTGCCTG GGCGGAAACC CGGGTGGACC ACTGCCAGGC
TGCTGGGCCC GAAGTTCAAT TTTAAGCCCC TGTGATGTCG TGTGGAAAAA TCCACAAGGT
ATTATCGCAG AGGCGCACGT CAATCAAGAG GATGTCATTT CAGGAGAAAT TAACCTCGAT
GTTCTATATG AAAATAGACT TGGGGGGGCA GCAACAACGT TCAAGGACAG ACGCAGAAAA
GCAGGCATAT ATAATATCTG GCCATCACAC ATTAAATAA
 
Protein sequence
MPRNFTVSAC QYIVTEINTF EDFITKVRIL LNKSQGADVV IFPELFTIEL FTLLKKWQER 
PISHLTLIDQ FTDAYKQLFQ QEAKERGQFI IAGSHLEQTG ADRYENVAHI WGPDGEHYAH
SKTHIFPAER GWYTQEGDKM AVFQLPFAKV GFNICYEAEI PECAATLAEQ GAELILTPSA
TFTEQGFWRV RHCCHARCIE NQIYLVHCCL GGNPGGPLPG CWARSSILSP CDVVWKNPQG
IIAEAHVNQE DVISGEINLD VLYENRLGGA ATTFKDRRRK AGIYNIWPSH IK