Gene SNSL254_A3375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3375 
Symbol 
ID6484253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3274747 
End bp3276246 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content51% 
IMG OID642738666 
Producttransporter 
Protein accessionYP_002042386 
Protein GI194443766 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.635182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAA ACAGACTTGC CAGCCATCTT GAACGTGGCG TTATTGGTTT CCCCACGACG 
CTTGCCAGCT CCGTCGGGCT GATTATGGCA AGCCCGGTGA TCCTGACCGT GACCAGTGGT
TTTGGCTCAG GGGGAGATAC CTTTGCTCTT GCGGTATTAC TGGCATTTAT TATGATGCAA
GCGCAGATTA CCACCTTTGC CGAAGCGGCA ACGCTTATTC CCACGACTGG CTCCGTCTAC
GACTATATTT CCTGTGGGAT GGGGCGTTTT TTCGCTATCA CCGGTGCGCT TTGCGCTTAC
CTGATCGTAC ACATTTTTGC CGGCACGGCA GAAACGATTC TCGCTGGCGT CATGGCGCTG
GTGAACTTTG AGTCTGTTAG CGAACACGTG GCCATGCAGC ACAATACCTG GATGGTTGGC
GTCGGCATGG TAGTGGTTTT CGGGTTACTG AATGCCATTG GTGTTGAAGT ATTTGGCAAG
GTGGAAGTGT TTCTTACATT CGGTATGTGG ACTACCCTGA CCATCTTCGG TTTATGCGGG
ATCCTGTTAT CCCCGGTCAC TCATCATTCC GGGTGGTTTG GCGCACCGCT TGATGTCAGT
AATCTTTCTG GTCTGTTTGG TTATATAGGC ATGGCGATGT TTATGTTCGT CGGTTGTGAA
CTGGTCACGC CAATGGCGCC GGAAATTAAA AAAGCGCATC GTACGATTCC CAGAGCAATG
GCGCTTGGCC TTTTAGCGGT GGCAGGTTGT ATGTTCCTCT ATGGCGCTGC GATTAACCGG
CAGGTAAATA ATGTGGTGGT CGATGCGGCA AACCATATCT TTTTACTGGA TACGCCGATG
GCTATTCCCG CCTTTGCCAA TCGTGTCATG GGACATGTCG GGCAATACTG GCTGGGCGTG
GGGTTGTTGT TAGCGGGATG TGCGACGATT AATACGCTAA TGGCGGCAGT ACCGCGTATT
ATATACGGCA TGGCGCTGGA CGGCGCTTTG CCGCGGTTTC TGACCTGGTT GCACCCCCGC
TTTAAAACAC CGGTCATCGC CATCGCATTC GGTGTTGCGA TTCCCTGTTT ACATGCCTGG
TATCTGAACG GTGATATCGA CCACATTGTT CCGCTGATCC TCGCTGCGGT CTGCGCCTGG
GGAGTAGCTT ATCTGCTGGT AACGTTATCG GTCGTTATCT TACGTATTCG GCGCCCCGAT
TTACCACGCG CTTACCGGGC CCCCTGGTTT CCCTTACCTC AGATTATTTC GAGCGTGGGT
ATTATTATCG CCATTATTAA TATCGCGCCT CCAGGAATGA ACAGTCGGGA TGTACTTATA
CCATTCGGTA TTATGCTTGG ATTGACTGCC GCCTATGCCT TATTCTGGAC ATTATGTGTG
CAACGGGTTA ATCCTTTCCT CCCGCTTCCG GTAGAAGAGG TCGTGGAACG GGCTATGGGC
AATTATGAAA AGCGAAACAA TGAAGAGATG ACGCCAGATG TCCTCCGTCC CCTGGTTTAA
 
Protein sequence
MFKNRLASHL ERGVIGFPTT LASSVGLIMA SPVILTVTSG FGSGGDTFAL AVLLAFIMMQ 
AQITTFAEAA TLIPTTGSVY DYISCGMGRF FAITGALCAY LIVHIFAGTA ETILAGVMAL
VNFESVSEHV AMQHNTWMVG VGMVVVFGLL NAIGVEVFGK VEVFLTFGMW TTLTIFGLCG
ILLSPVTHHS GWFGAPLDVS NLSGLFGYIG MAMFMFVGCE LVTPMAPEIK KAHRTIPRAM
ALGLLAVAGC MFLYGAAINR QVNNVVVDAA NHIFLLDTPM AIPAFANRVM GHVGQYWLGV
GLLLAGCATI NTLMAAVPRI IYGMALDGAL PRFLTWLHPR FKTPVIAIAF GVAIPCLHAW
YLNGDIDHIV PLILAAVCAW GVAYLLVTLS VVILRIRRPD LPRAYRAPWF PLPQIISSVG
IIIAIINIAP PGMNSRDVLI PFGIMLGLTA AYALFWTLCV QRVNPFLPLP VEEVVERAMG
NYEKRNNEEM TPDVLRPLV