Gene SNSL254_A3370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3370 
Symbol 
ID6486320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp3268994 
End bp3269872 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content53% 
IMG OID642738661 
Producthypothetical protein 
Protein accessionYP_002042381 
Protein GI194444613 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.562011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.570732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGC GCCATATTCG CTATTTTCTC GCCGTCGCTG AAGAGCGGCA TTTCACGCGG 
GCTGCGACAA AATTAGGCAT AGGTCAGCCG CCGCTAAGCC AACAGATTAA GGATCTGGAA 
AGAGAGCTGG GAGCGCAGCT ATTCCGGAGA GTGCCTCATG GCGCGGAATT AACCGAGGCT 
GGAAAAGCAT TTTATGATGT TGTTAAAGGG ATGCCTGCTA CCGCGACAAG AGCCGTGCTG 
GCGGCGCAGC GTGTCGCCAG GGGGGAGTCG GGCGTGTTAA GGGTGGGTTT TACTGCCTCT 
GCGGCATTTA ACAGTGTGGT GCCCGGCGCA ATCCGTACTT TCAAGCGGGC TTATCCTGAC 
GTTCGTTTGC AGCTTGAGGA AGGAAATACA ACCCAACTGG CTGATGAATT GAATGAAGGA 
TCGCTGGATG TTGCCTTTCT GAGACCCGGT TTTACAGGCA ATGAACGGTT CCAGCTCAGG 
TTACTGTCTG AAGAGCCAAT GGTTATTGTG CTGGCAGAAA CGCATCCTGC TGCGGCGTGT 
AAACAGATTG CACTCTCGAT TCTCAAAGAT GAGTTTTTTT TACTCTTCCC ACGTGAAATC 
GGCCTGTCGC TTTATGACGC AGTGATCAAG GCCTGCGGTA AAGCGGGCTT TGAACCGAAA 
ATTGGTCAAC TCGTGCCGCA AATTTCGTCA GTCATTAACC TTGTGTCGGC AGAGATGGGC 
GTGTCGATGG TTCCAGATTC AATGAGACAG GTTAATGTCA AGGGAGTAGT ATACCGCCCC 
GTTGCAGACC AGATGCCCGT CGCAAAGCTG GCTCTGGCAT ACCGGCGCGG CGATACATCG 
CCAACGCTGA GAAACTTCAT CCTGAAAGTC ACTGGCTGA
 
Protein sequence
MELRHIRYFL AVAEERHFTR AATKLGIGQP PLSQQIKDLE RELGAQLFRR VPHGAELTEA 
GKAFYDVVKG MPATATRAVL AAQRVARGES GVLRVGFTAS AAFNSVVPGA IRTFKRAYPD 
VRLQLEEGNT TQLADELNEG SLDVAFLRPG FTGNERFQLR LLSEEPMVIV LAETHPAAAC 
KQIALSILKD EFFLLFPREI GLSLYDAVIK ACGKAGFEPK IGQLVPQISS VINLVSAEMG 
VSMVPDSMRQ VNVKGVVYRP VADQMPVAKL ALAYRRGDTS PTLRNFILKV TG