Gene SNSL254_A3365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3365 
Symbol 
ID6483610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3264667 
End bp3265374 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content51% 
IMG OID642738656 
Producthypothetical protein 
Protein accessionYP_002042377 
Protein GI194444354 
COG category[R] General function prediction only 
COG ID[COG1811] Uncharacterized membrane protein, possible Na+ channel or pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.647996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.509414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAATTG GACCTTTTAT TAACGCTGGC GCAATTTTAT TCGGCGGCGT TATTGGCGCG 
CTGTTAAGTC AGCGTCTGCC AGAACGGATT CGCGTCTCAA TGACGTCTAT TTTTGGTCTG
TGCTCTCTGG GAATTGGTAT TCTGCTGGTG ATGAAGTGCG CTAATCTTCC GGTGATGGTG
CTGGCGACAC TGGTCGGCGC GCTTATCGGC GAGTTTTGTT TGCTGGAAAA AGGCATTAAT
GGCGCAGTCG CGAAAATCCA ACAATTATTT ATGGCATCGG GTAAGAAGCC GACACACGAC
TCATTTATTC AAAGTTACGT CGCTATCATT GTACTTTTTT GCGCCAGCGG CACCGGTATT
TTCGGCGCGA TGCATGAAGG GATGACCGGC GATCCAAACA TTTTGATCGC TAAATCTTTT
CTGGATTTTT TCACTGCCAT TATTTTCGCC TGTTCGCTTG GCATCGCCGT TTCGGCGATT
TGCGCGCCGA TGTTGATTAT CCAGTTAACG CTTGCCGCCT GCGCCACCCT CATTCTTCCA
CTGACTACGC CGGCAATGAT GGGCGACTTT AGCGCTGTGG GCGGACTGCT GCTGGTGGCG
ACCGGCTTGC GTGTATGTGG AATCAAAATG TTTCCGGTAG TGAATATGCT CCCGGCGCTG
TTGCTGGCGA TGCCGATCTC CGCCGCATGG GCGATGTTTT TTGCCTGA
 
Protein sequence
MVIGPFINAG AILFGGVIGA LLSQRLPERI RVSMTSIFGL CSLGIGILLV MKCANLPVMV 
LATLVGALIG EFCLLEKGIN GAVAKIQQLF MASGKKPTHD SFIQSYVAII VLFCASGTGI
FGAMHEGMTG DPNILIAKSF LDFFTAIIFA CSLGIAVSAI CAPMLIIQLT LAACATLILP
LTTPAMMGDF SAVGGLLLVA TGLRVCGIKM FPVVNMLPAL LLAMPISAAW AMFFA