Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3357 |
Symbol | trmB |
ID | 6484124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3257145 |
End bp | 3257864 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642738648 |
Product | tRNA (guanine-N(7)-)-methyltransferase |
Protein accession | YP_002042369 |
Protein GI | 194444176 |
COG category | [R] General function prediction only |
COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 0.343767 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACG ACGTCATTTC ACCGGAATTT GATGAAAACG GTCGCCCGCT GCGCCGTATT CGTAGTTTTG TTCGTCGCCA GGGGCGACTG ACAAAGGGGC AAGAGCACGC GCTGGAAAAC TACTGGCCGG TGATGGGCGT CGAGTTCAGC GAAGCGCCGG TAGATTTCGC CACGTTGTTT GGTCGCGAAG CGCCGGTGAC GCTGGAGATT GGTTTTGGCA TGGGGGCGTC TCTGGTGGCG ATGGCGAAAG CGCGCCCGGA GCAGAATTTC CTCGGCATTG AAGTGCATTC ACCCGGTGTC GGCGCGTGTC TGGCGTCCGC TCATGAAGAG GGCGTTGAAA ACCTGCGTGT CATGTGCCAC GACGCGGTAG AAGTGTTGCA TAAAATGATT CCTGACAATT CTTTATCGAT GGTTCAGCTC TTTTTCCCTG ACCCGTGGCA TAAAGCGCGT CATAATAAAC GCCGTATCGT TCAGGTGCCG TTTGCTGAAC TGGTATTGAG CAAGCTGAAA TTGGGCGGCG TTTTCCATAT GGCGACCGAC TGGGAAGCGT ATGCGGAACA CATGCTTGAA GTCATGTCTT CTATCGACGG GTACAAAAAT CTGTCAGAGA GCAATGATTA TGTACCGCGC CCGGAATCGC GCCCGGTAAC GAAATTTGAA CAACGTGGCC ATCGTCTTGG TCATGGCGTA TGGGACTTAA TGTTCGAGAG GGTGAAATAA
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Protein sequence | MKNDVISPEF DENGRPLRRI RSFVRRQGRL TKGQEHALEN YWPVMGVEFS EAPVDFATLF GREAPVTLEI GFGMGASLVA MAKARPEQNF LGIEVHSPGV GACLASAHEE GVENLRVMCH DAVEVLHKMI PDNSLSMVQL FFPDPWHKAR HNKRRIVQVP FAELVLSKLK LGGVFHMATD WEAYAEHMLE VMSSIDGYKN LSESNDYVPR PESRPVTKFE QRGHRLGHGV WDLMFERVK
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