| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3346 |
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| Symbol | |
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| ID | 6484340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3249279 |
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| End bp | 3250259 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642738637 |
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| Product | twitching mobility protein |
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| Protein accession | YP_002042358 |
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| Protein GI | 194444916 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.732924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 0.263184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATGG AAGAAATTGT GACGCTTAGT GTAAAGCATA ACGTCTCGGA TCTACACCTG
TGTAACGCCT GGCCTGCGCG ATGGCGCAAA CAAGGACGCA TGGAGACAGC GCCTTTTACC
GCGCCAGATG TCGACAGGCT TCTGCTTGAT TGGCTTAATG ACGCGCAACA ATATCAGTGG
CGAACGCACG GTCAGCTTGA TTTCGCCGTC TCGCTGTCTG GCACGCGGCG CCTGCGCGCC
AGTGCGTTCA CACATCAACA GGGAACGTCG CTGGCGCTAC GGCTATTGCC CGAGCGTTGT
CCTGATCTGG CGGAAATCCA GACGCCGCCG ATAGTACCCG CACTGCTTGC CAGCGAGAAC
GGACTGATTC TGGTCACTGG TGCTACTGGC TGCGGGAAAT CCACTACGCT GGCGGCGATG
GTGGGACATC TTAATCAACA TGCCGATAAA CACATCCTGA CGCTGGAAGA TCCTATTGAG
TACCGTTACA CCAGCAAGCG TTGCCTGATA CAGCAGCGGG AAATCGGCCA GCATTGTGCC
ACTTTTGCCG CCGGGCTGCG CGCGGCGTTA CGTGAAGATC CCGATGTCAT TTTACTGGGA
GAGCTGCGTG ACAGCGAGAC CATTCGCCTG GCGCTGACGG CGGCGGAAAC GGGGCATCTG
GTACTGGCAA CCCTGCATAC TCGCGGTGCG GCGCAGGCGG TGGAAAGATT AGTGGATAGT
TTTCCGGCGC AGGAAAAAGA ACCGGTACGC AGCCAACTGG CGGGTAGTCT GCGCGCCGTA
CTATCACAAA AACTGGAGGT CGACAGACAG GATGGGCGCG TGGCGTTGTT TGAATTACTG
ATTAATACGC CAGCCACAGG GAATTTGATC CGTGAAGGCA AACTCCATCA GTTGGCCCAC
GTGATACAAA CCGGGCAGCA GCAGGGGATG ATGACATTCG CCCAGAGCGC GCAATGGCGT
CAGGCGCAGG GACGACTGTA G
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| Protein sequence | MNMEEIVTLS VKHNVSDLHL CNAWPARWRK QGRMETAPFT APDVDRLLLD WLNDAQQYQW
RTHGQLDFAV SLSGTRRLRA SAFTHQQGTS LALRLLPERC PDLAEIQTPP IVPALLASEN
GLILVTGATG CGKSTTLAAM VGHLNQHADK HILTLEDPIE YRYTSKRCLI QQREIGQHCA
TFAAGLRAAL REDPDVILLG ELRDSETIRL ALTAAETGHL VLATLHTRGA AQAVERLVDS
FPAQEKEPVR SQLAGSLRAV LSQKLEVDRQ DGRVALFELL INTPATGNLI REGKLHQLAH
VIQTGQQQGM MTFAQSAQWR QAQGRL
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