Gene SNSL254_A3327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3327 
Symbol 
ID6486060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3231684 
End bp3232691 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content51% 
IMG OID642738619 
Productureidoglycolate dehydrogenase 
Protein accessionYP_002042340 
Protein GI194445675 
COG category[C] Energy production and conversion 
COG ID[COG2055] Malate/L-lactate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.388816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACAA TATTAGTCAA AGAAAATGAA TTGAAAGCGC TGGCGTTTAA TAAACTCACC 
CAGGCGGGTC TTGACGCGCA AACGGCGCAG CAGGTAGCCG ACGTTTTGGT TCATGCCGAT
ATCACCGGCG TTCACTCCCA CGGCGTTATT CGCGTAGAGC ACTATTGTAC CCGCCTGAAC
GCAGGCGGGC TCAATCCAAA AGCAACATTC AGCATCGAAC AGATTTCGCC TTCTGTCGCT
ATTCTGGACT CTGATGATGG AATGGGGCAC TGCGCGCTGA TAAAGGCGAC AGACCACGCT
ATTAGTCTGG CAAGAGAGAC GGGGCTGGGC TTCGTCAGCG TCAAAAATAC GTCCCACTGC
GGCGCGCTCT CGTGGTTTAT TGAGCAGGCG ACAAGCCAGG GAATGGTGGC TATCGCCATG
ACGCAAACGG ATACCTGCGT TGCGCCGTAT GGCGGCGCGG AGCGCTTTCT GGGGACTAAC
CCAATCGCCT TCGGCTTCCC CGTTAAAGAC AGCCATCCGA TGATCGTCGA TATGGCGACC
AGCGCCATTG CGTTTGGTAA AATTCTGCAC GCCAAAGAAA CCGGGAAACC AATAGGTCAT
GGCCTGGCGC TGGATAAAGA GGGACATATC ACTACCGATC CGCATAAAAT TGAAAATCTG
CTGCCCTTTG GCGGACACAA AGGTTCTGGT ATTGCCCTGG CGATTGATGC GCTCACGGGC
GTCCTGATGG GGGCAAACTT TAGCAACCAT ATTGTTCGGA TGTATGGCGA CTATGACAAG
ATGCGCAAGT TAGCGAGTCT GGTTATCGTT ATTGATCCGC AGATGTTGGG CAATCCGCTG
TTTTCCTCAA TAATGAGCAC AATGGTCAAT GAGCTAAGGG CTGTAAAACC GATGCCCGGT
GTTGATAAAG TGCTGGCGCC AAACGATCCG CAAATCGCCT ATAAAGAAAA ATGTTTAAAA
GAAGGTATTC CTGTGGCTGA GGGTATTTAC CAGTACCTGA TTGGCTGA
 
Protein sequence
MSTILVKENE LKALAFNKLT QAGLDAQTAQ QVADVLVHAD ITGVHSHGVI RVEHYCTRLN 
AGGLNPKATF SIEQISPSVA ILDSDDGMGH CALIKATDHA ISLARETGLG FVSVKNTSHC
GALSWFIEQA TSQGMVAIAM TQTDTCVAPY GGAERFLGTN PIAFGFPVKD SHPMIVDMAT
SAIAFGKILH AKETGKPIGH GLALDKEGHI TTDPHKIENL LPFGGHKGSG IALAIDALTG
VLMGANFSNH IVRMYGDYDK MRKLASLVIV IDPQMLGNPL FSSIMSTMVN ELRAVKPMPG
VDKVLAPNDP QIAYKEKCLK EGIPVAEGIY QYLIG