Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3324 |
Symbol | speB |
ID | 6483592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3228877 |
End bp | 3229797 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642738616 |
Product | agmatinase |
Protein accession | YP_002042337 |
Protein GI | 194443030 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
TIGRFAM ID | [TIGR01230] agmatinase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0546446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 0.86641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCT TAGGTCATCA GTACGATAAC TCACTGGTTT CTAATGCGTT TGGTTTTTTA CGTCTGCCAA TGAACTTCCA GCCGTATGAC AGCGATGCCG ACTGGGTGAT CACTGGCGTA CCGTTTGATA TGGCAACGTC CGGTCGCGCT GGCGGTCGTC ATGGCCCGGC GGCGATCCGT CAGGTGTCGA CCAACCTCGC CTGGGAACAT CACCGTTTCC CGTGGAATTT TGACATGCGC GAGCGCCTGA ACGTCGTGGA CTGCGGCGAT TTGGTGTATG CGTTTGGCGA TGCCCGTGAG ATGAGTGAAA AATTACAGGC GCACGCTGAA AAACTGCTGT CTGCAGGCAA GCGTATGCTC TCTTTCGGCG GCGACCACTT CGTCACGCTG CCGCTGCTGC GCGCCCACGC GAAACATTTT GGCAAAATGG CGCTGGTACA TTTTGACGCG CATACCGATA CCTACGCTAA CGGCTGCGAA TTCGATCACG GCACGATGTT CTACACCGCG CCGAAAGAAG GCCTGATCGA TCCGCATCAT TCGGTACAGA TCGGTATTCG CACTGAGTTT GACAAAGACA ATGGCTTTAC CGTGCTGGAT GCCTGCCAGG TCAACGATCG CGGCGTGGAT GATATTCTCG CTCAGGTGAA ACAGATCGTC GGCGATATGC CGGTCTATCT GACCTTTGAT ATCGACTGTC TGGATCCGGC GTTTGCGCCT GGCACCGGTA CGCCGGTGAT CGGCGGTTTG ACCTCCGATC GCGCCATTAA ACTGGTACGC GGTCTGAAAG ATCTGAACAT TGTCGGTATG GATGTAGTGG AAGTCGCGCC GGCTTACGAT CAGTCGGAGA TCACCGCTCT GGCGGCCGCG ACGCTGGCAT TAGAAATGCT CTATATCCAG GCGGCGAAGA AGGGCGAGTA A
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Protein sequence | MSTLGHQYDN SLVSNAFGFL RLPMNFQPYD SDADWVITGV PFDMATSGRA GGRHGPAAIR QVSTNLAWEH HRFPWNFDMR ERLNVVDCGD LVYAFGDARE MSEKLQAHAE KLLSAGKRML SFGGDHFVTL PLLRAHAKHF GKMALVHFDA HTDTYANGCE FDHGTMFYTA PKEGLIDPHH SVQIGIRTEF DKDNGFTVLD ACQVNDRGVD DILAQVKQIV GDMPVYLTFD IDCLDPAFAP GTGTPVIGGL TSDRAIKLVR GLKDLNIVGM DVVEVAPAYD QSEITALAAA TLALEMLYIQ AAKKGE
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