Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3317 |
Symbol | |
ID | 6482458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3220597 |
End bp | 3221106 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642738610 |
Product | putative DNA-binding transcriptional regulator |
Protein accession | YP_002042331 |
Protein GI | 194445240 |
COG category | [K] Transcription |
COG ID | [COG3722] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACGC TGACAGAAGA CGATGTGCTT GAGCAACTGG ATGCTCAAAA TAATTTACTT TCGTTTATGA CGACGGCACA TAACATTTTG CTCCAGGGCA TTAAGCGCTT TCTGCCGTCG CTATTTGTCG ATAATGATGA AGAAATTGTG GAATATGCAG TGAAGCCGTT ACTCGCCCAA AGCGGGCCGC TTGACGATAT CGACGTTGCA TTACGTCTGA TTTATGCGCT GGGGAAAATG GATAAATGGC TCTACGCTGA CATCACCCAT TTTTCTCAGT TTTATCAGTA CCTGCATGAA CAGGACGCGA TTCCCGGTTT TGCCGACGAC ATTACCTGGG ACTTCATCAG TAACGTTAAC TGTATTACCC GTAATGCGCC CTTATATGGC GCGCTGGAGT CGATGAAGTT TGCCGACTTC GCCGCGTGGT CTGAGGTGCG CTTTACCGGT ATGGTCAAAA CGGCGATGGC GCTGGCGGTA ACGACAATTT TAAAGGAATT AACGCCGTGA
|
Protein sequence | MTTLTEDDVL EQLDAQNNLL SFMTTAHNIL LQGIKRFLPS LFVDNDEEIV EYAVKPLLAQ SGPLDDIDVA LRLIYALGKM DKWLYADITH FSQFYQYLHE QDAIPGFADD ITWDFISNVN CITRNAPLYG ALESMKFADF AAWSEVRFTG MVKTAMALAV TTILKELTP
|
| |