Gene SNSL254_A3317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3317 
Symbol 
ID6482458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3220597 
End bp3221106 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content48% 
IMG OID642738610 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_002042331 
Protein GI194445240 
COG category[K] Transcription 
COG ID[COG3722] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC TGACAGAAGA CGATGTGCTT GAGCAACTGG ATGCTCAAAA TAATTTACTT 
TCGTTTATGA CGACGGCACA TAACATTTTG CTCCAGGGCA TTAAGCGCTT TCTGCCGTCG
CTATTTGTCG ATAATGATGA AGAAATTGTG GAATATGCAG TGAAGCCGTT ACTCGCCCAA
AGCGGGCCGC TTGACGATAT CGACGTTGCA TTACGTCTGA TTTATGCGCT GGGGAAAATG
GATAAATGGC TCTACGCTGA CATCACCCAT TTTTCTCAGT TTTATCAGTA CCTGCATGAA
CAGGACGCGA TTCCCGGTTT TGCCGACGAC ATTACCTGGG ACTTCATCAG TAACGTTAAC
TGTATTACCC GTAATGCGCC CTTATATGGC GCGCTGGAGT CGATGAAGTT TGCCGACTTC
GCCGCGTGGT CTGAGGTGCG CTTTACCGGT ATGGTCAAAA CGGCGATGGC GCTGGCGGTA
ACGACAATTT TAAAGGAATT AACGCCGTGA
 
Protein sequence
MTTLTEDDVL EQLDAQNNLL SFMTTAHNIL LQGIKRFLPS LFVDNDEEIV EYAVKPLLAQ 
SGPLDDIDVA LRLIYALGKM DKWLYADITH FSQFYQYLHE QDAIPGFADD ITWDFISNVN
CITRNAPLYG ALESMKFADF AAWSEVRFTG MVKTAMALAV TTILKELTP