Gene SNSL254_A3312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3312 
Symbol 
ID6485034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp3217281 
End bp3217859 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content56% 
IMG OID642738605 
Productsignal transduction histidine kinase LytS 
Protein accessionYP_002042326 
Protein GI194443495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGTC GCCCGTTTTC CAGCCAGTCT CTGGTGCTGA TTGTCATCGC CATTGCCATC 
AATATGATTG GCGGACAGCT TATTAGCATG TTGAAGCTGC CTATTTTTCT CGACTCGATC 
GGCACCTTAA TTAGCGCGGT ACTGTTAGGG CCGTTCATCG GCATGTTGAC TGGGCTTCTG 
ACCAACTTGC TGTGGGGGCT GCTTACCGAC CCTATCGCTG CCGCGTTTGC CCCGGTAGCG 
ATGGTTATCG GTCTGGTCGC CGGGTGGCTG GCGCGCGCAG GCTGGTTTCG TACCCTGCCC 
AAAGTGATCG TCAGCGGCGT CGTCATTACA TTAGCGGTGA CGCTGGTCGC CGTACCGCTT 
CGTACCGCGC TTTTTGGCGG CGTTACCGGT AGCGGCGCTG ATTTATTCGT CGCCTGGATG 
CATTCAATGG GCCAAAACCT GGTGGAGTCG GTCGCGATTA CCGTCATAGG CGCTAATCTG 
GTCGATAAAA TTCTGACGGC GATCATCGTT TGGGTGCTGC TGCGTCAGCT ACCGTTACGT 
ACGACACGGC ATTTTCCTGC GATGTCAGCC GTACGCTAA
 
Protein sequence
MARRPFSSQS LVLIVIAIAI NMIGGQLISM LKLPIFLDSI GTLISAVLLG PFIGMLTGLL 
TNLLWGLLTD PIAAAFAPVA MVIGLVAGWL ARAGWFRTLP KVIVSGVVIT LAVTLVAVPL 
RTALFGGVTG SGADLFVAWM HSMGQNLVES VAITVIGANL VDKILTAIIV WVLLRQLPLR 
TTRHFPAMSA VR