Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3309 |
Symbol | pgk |
ID | 6484303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3214225 |
End bp | 3215388 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642738602 |
Product | phosphoglycerate kinase |
Protein accession | YP_002042323 |
Protein GI | 194446067 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTAA TTAAGATGAC CGATCTGGAT CTGGCCGGGA AACGCGTTTT TATCCGTGCG GATCTGAACG TACCTGTTAA AGAAGGGAAA GTGACCAGCG ACGCGCGTAT CCGCGCTTCT CTGCCGACCA TCGAACTGGC TCTGAAACAG GGCGCGAAAG TGATGGTAAC TTCCCACCTG GGTCGTCCTA CCGAAGGCGA GTACAACGAA GAATTCTCTC TGCTGCCGGT TGTTAACTAC CTGAAAGACA AACTGTCTAA CCCGGTTCGC CTGGTCAAAG ATTACCTGGA CGGCGTTGAC GTGGCCGAAG GTGAGCTGGT GGTTCTGGAA AACGTTCGCT TTAACAAAGG CGAAAAGAAA GACGACGAAG CGCTGTCTAA AAAATATGCC GCCCTGTGTG ACGTATTCGT GATGGACGCC TTTGGTACCG CGCACCGCGC GCAGGCTTCT ACCCACGGTA TCGGCAAATT TGCTGATGTT GCGTGCGCAG GCCCGCTGCT GGCCGCTGAA CTGGATGCGC TGGGTAAAGC GCTGAAAGAA CCGGCTCGTC CGATGGTGGC TATCGTTGGT GGTTCTAAAG TATCTACCAA ACTGACCGTT CTGGATTCCC TGTCTAAAAT CGCTGACCAG CTGATTGTCG GCGGCGGTAT CGCCAACACC TTCGTTGCCG CTCAGGGCCA CAGTGTCGGT AAATCCCTGT ACGAAGCTGA CCTGGTTGAC GAAGCAAAAC GTCTGCTGAC CACTTGCGAT ATCCCGGTTC CGACCGATGT TCGCGTTGCC ACCGAGTTCT CCGAAACCGC ACCGGCGACT CTGAAATCCG TTAACGACGT GAAAGAAGAC GAGCAGATCC TGGATATCGG CGATGCTTCC GCTCAGCAGC TGGCTGAAAT CCTCAAGAAT GCCAAAACCA TTCTGTGGAA CGGCCCGGTT GGCGTGTTTG AGTTCCCGAA CTTCCGTAAA GGGACTGAAA TCGTGGCGAA TGCCATCGCT GATAGCGAAG CGTTTTCCAT CGCTGGCGGC GGCGACACCC TGGCGGCAAT CGACCTGTTC GGCATTGCTG ACAAAATTTC CTACATTTCT ACTGGCGGCG GCGCATTCCT CGAATTCGTG GAAGGTAAAG TTCTGCCAGC CGTAGCGATG CTCGAAGAGC GCGCTAAGAA GTAA
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Protein sequence | MSVIKMTDLD LAGKRVFIRA DLNVPVKEGK VTSDARIRAS LPTIELALKQ GAKVMVTSHL GRPTEGEYNE EFSLLPVVNY LKDKLSNPVR LVKDYLDGVD VAEGELVVLE NVRFNKGEKK DDEALSKKYA ALCDVFVMDA FGTAHRAQAS THGIGKFADV ACAGPLLAAE LDALGKALKE PARPMVAIVG GSKVSTKLTV LDSLSKIADQ LIVGGGIANT FVAAQGHSVG KSLYEADLVD EAKRLLTTCD IPVPTDVRVA TEFSETAPAT LKSVNDVKED EQILDIGDAS AQQLAEILKN AKTILWNGPV GVFEFPNFRK GTEIVANAIA DSEAFSIAGG GDTLAAIDLF GIADKISYIS TGGGAFLEFV EGKVLPAVAM LEERAKK
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