Gene SNSL254_A3309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3309 
Symbolpgk 
ID6484303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3214225 
End bp3215388 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content54% 
IMG OID642738602 
Productphosphoglycerate kinase 
Protein accessionYP_002042323 
Protein GI194446067 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTAA TTAAGATGAC CGATCTGGAT CTGGCCGGGA AACGCGTTTT TATCCGTGCG 
GATCTGAACG TACCTGTTAA AGAAGGGAAA GTGACCAGCG ACGCGCGTAT CCGCGCTTCT
CTGCCGACCA TCGAACTGGC TCTGAAACAG GGCGCGAAAG TGATGGTAAC TTCCCACCTG
GGTCGTCCTA CCGAAGGCGA GTACAACGAA GAATTCTCTC TGCTGCCGGT TGTTAACTAC
CTGAAAGACA AACTGTCTAA CCCGGTTCGC CTGGTCAAAG ATTACCTGGA CGGCGTTGAC
GTGGCCGAAG GTGAGCTGGT GGTTCTGGAA AACGTTCGCT TTAACAAAGG CGAAAAGAAA
GACGACGAAG CGCTGTCTAA AAAATATGCC GCCCTGTGTG ACGTATTCGT GATGGACGCC
TTTGGTACCG CGCACCGCGC GCAGGCTTCT ACCCACGGTA TCGGCAAATT TGCTGATGTT
GCGTGCGCAG GCCCGCTGCT GGCCGCTGAA CTGGATGCGC TGGGTAAAGC GCTGAAAGAA
CCGGCTCGTC CGATGGTGGC TATCGTTGGT GGTTCTAAAG TATCTACCAA ACTGACCGTT
CTGGATTCCC TGTCTAAAAT CGCTGACCAG CTGATTGTCG GCGGCGGTAT CGCCAACACC
TTCGTTGCCG CTCAGGGCCA CAGTGTCGGT AAATCCCTGT ACGAAGCTGA CCTGGTTGAC
GAAGCAAAAC GTCTGCTGAC CACTTGCGAT ATCCCGGTTC CGACCGATGT TCGCGTTGCC
ACCGAGTTCT CCGAAACCGC ACCGGCGACT CTGAAATCCG TTAACGACGT GAAAGAAGAC
GAGCAGATCC TGGATATCGG CGATGCTTCC GCTCAGCAGC TGGCTGAAAT CCTCAAGAAT
GCCAAAACCA TTCTGTGGAA CGGCCCGGTT GGCGTGTTTG AGTTCCCGAA CTTCCGTAAA
GGGACTGAAA TCGTGGCGAA TGCCATCGCT GATAGCGAAG CGTTTTCCAT CGCTGGCGGC
GGCGACACCC TGGCGGCAAT CGACCTGTTC GGCATTGCTG ACAAAATTTC CTACATTTCT
ACTGGCGGCG GCGCATTCCT CGAATTCGTG GAAGGTAAAG TTCTGCCAGC CGTAGCGATG
CTCGAAGAGC GCGCTAAGAA GTAA
 
Protein sequence
MSVIKMTDLD LAGKRVFIRA DLNVPVKEGK VTSDARIRAS LPTIELALKQ GAKVMVTSHL 
GRPTEGEYNE EFSLLPVVNY LKDKLSNPVR LVKDYLDGVD VAEGELVVLE NVRFNKGEKK
DDEALSKKYA ALCDVFVMDA FGTAHRAQAS THGIGKFADV ACAGPLLAAE LDALGKALKE
PARPMVAIVG GSKVSTKLTV LDSLSKIADQ LIVGGGIANT FVAAQGHSVG KSLYEADLVD
EAKRLLTTCD IPVPTDVRVA TEFSETAPAT LKSVNDVKED EQILDIGDAS AQQLAEILKN
AKTILWNGPV GVFEFPNFRK GTEIVANAIA DSEAFSIAGG GDTLAAIDLF GIADKISYIS
TGGGAFLEFV EGKVLPAVAM LEERAKK