| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3278 |
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| Symbol | xerD |
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| ID | 6486628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3187959 |
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| End bp | 3188855 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642738574 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_002042295 |
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| Protein GI | 194446221 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 88 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGG ATTTAGCGCG TATTGAGCAG TTTCTGGATG CCCTGTGGCT GGAACGAAAT
CTGGCGGAAA ATACATTAAG CGCGTATCGT CGCGATTTAT CGATGGTCGT TGCGTGGTTG
CATCATCGCG GAAAAACGCT TGCGACGGCG CAGGCTGATG ATTTACAAAC GCTGCTGGCT
GAACGGGTGG AGGGCGGATA CAAAGCGACC AGTTCCGCAC GCCTGTTAAG CGCTATGCGG
CGCTTCTTCC AGCATCTGTA CCGTGAAAAG TATCGTGAGG ATGATCCGAG CGCGCAGTTG
GCCTCGCCTA AGCTTCCGCA GCGTTTACCG AAAGACCTTA GCGAGGCGCA GGTTGAGCGG
CTCTTGCAGG CGCCGCTTAT TGATCAACCT TTGGAGCTGC GCGATAAAGC TATGTTGGAA
GTGCTGTATG CCACCGGTTT GCGCGTGTCG GAACTGGTGG GGCTGACAAT GAGCGATATC
AGTCTGCGGC AGGGCGTGGT GCGGGTTATC GGTAAAGGCA ATAAAGAGCG GTTGGTGCCG
TTAGGTGAAG AGGCGGTATA TTGGCTGGAA ACGTATCTGG AGCATGGGCG TCCCTGGTTA
CTCAATGGCG TATCGATTGA CGTATTATTC CCCAGCCAGC GTGCGCAGCA GATGACGCGA
CAGACCTTCT GGCACCGTAT TAAACATTAT GCGGTACTGG CTGGAATCGA TAGCGAAAAA
CTATCGCCGC ATGTTTTACG TCACGCTTTC GCCACGCATT TGCTGAATCA CGGCGCCGAC
TTGCGCGTTG TACAAATGCT ACTTGGGCAT AGCGATCTTT CGACGACACA AATTTATACG
CATGTCGCAA CGGAGCGTTT GCGTCAACTT CATCAACAGC ACCATCCGCG GGCATGA
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| Protein sequence | MEQDLARIEQ FLDALWLERN LAENTLSAYR RDLSMVVAWL HHRGKTLATA QADDLQTLLA
ERVEGGYKAT SSARLLSAMR RFFQHLYREK YREDDPSAQL ASPKLPQRLP KDLSEAQVER
LLQAPLIDQP LELRDKAMLE VLYATGLRVS ELVGLTMSDI SLRQGVVRVI GKGNKERLVP
LGEEAVYWLE TYLEHGRPWL LNGVSIDVLF PSQRAQQMTR QTFWHRIKHY AVLAGIDSEK
LSPHVLRHAF ATHLLNHGAD LRVVQMLLGH SDLSTTQIYT HVATERLRQL HQQHHPRA
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