Gene SNSL254_A3267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3267 
Symbol 
ID6483318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3178690 
End bp3179088 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content51% 
IMG OID642738564 
Productplasmid maintenance protein 
Protein accessionYP_002042286 
Protein GI194445814 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAT TCATGCTTGA TACCAATACC TGTATTTTCA CCATCAAAAA TAAGCCCGAA 
CACATCAGAG AACGCTTCAA CCTCAATACA TCCCGAATGT GTATCAGCTC CATCACCTTA
ATGGAGCTGA TTTACGGTGC TGAAAAAAGC CTGGCGCCGG AGCGTAATCT TGCCGTCGTG
GAGGGATTTA TCTCCCGCCT TGAGGTTCTG GATTACGATA CACAGGCAGC GATACATACC
GGTCAAATCC GTGCCGAACT GGCCCGCAAG GGAACACCTG TCGGGCCTTA TGACCAGATG
ATTGCTGGCC ATGCCCGTAG CCGCGGACTG GTCGTCGTCA CAAACAATCT CCGCGAGTTT
GAACGCATTC CGGGTATCCG AATCGAAGAC TGGTGCTAA
 
Protein sequence
MLKFMLDTNT CIFTIKNKPE HIRERFNLNT SRMCISSITL MELIYGAEKS LAPERNLAVV 
EGFISRLEVL DYDTQAAIHT GQIRAELARK GTPVGPYDQM IAGHARSRGL VVVTNNLREF
ERIPGIRIED WC