| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3260 |
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| Symbol | |
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| ID | 6486195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3171974 |
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| End bp | 3172717 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642738557 |
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| Product | pili assembly chaperone protein |
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| Protein accession | YP_002042279 |
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| Protein GI | 194444169 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 0.163968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAACA GCAGAAGAAG CCGTGTGATT TTACTCGCAC TGGCGGCAGC ATGGAGCCAG
TACAGCCCGG CGGCCGTCAA TGTTGACCGG ACCCGTATTA TCATGGATGC GCCGCAGAAA
ACGGTGGCCA TCACGCTGAA TAACGATGAC AAAACCACGC CGTTCCTGGC GCAGTCCTGG
GTGACGGACG CTGACGGGGT GAGAACCGAT GCGCTGATGG CGCTGCCGCC GCTGCAGCGT
ATTGATGCCG GACAGAAATC CCAGGTCCGT ATCACCCAGG TTCGCGGGCT GACAGATAAG
CTCCCTCAGG ACAGGGAAAC ACTGTTCTGG TTTAACGTGC GGGGCGTTCC CCCGAAGCCA
GAAGACGACA ACGTTCTGCA ACTGGCCATG CAGAGCCAGC TGAAACTGTT TTACCGTCCG
AAAGCCATTA TCAGAAGCAG CAGTGACCAG CCGGAAAGAA AGCTGACTGC TGAGCGGAAT
GCGGGACATC TGACCCTCAG AAACCCGACG CCGTACTACA TCACTGTGGC GTGGCTGGGA
GCAGACCGTA GCCACAGGCT CAGCGGTTTC CGCGAGGGCG TGATGGTGCC GCCCCTGGGG
AACCTGCCTT TAAAGGCTGT TCTGCCGGCA GAAACCCGGA CGCTGTGGGT GGGGTATATT
GATGATTACG GGGGACTGCA GATGAATCGC TACACCTGCG ATGCCCTGAA CTGTGCGTTT
AAGGACGCAG GGGCGACATC ATGA
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| Protein sequence | MKNSRRSRVI LLALAAAWSQ YSPAAVNVDR TRIIMDAPQK TVAITLNNDD KTTPFLAQSW
VTDADGVRTD ALMALPPLQR IDAGQKSQVR ITQVRGLTDK LPQDRETLFW FNVRGVPPKP
EDDNVLQLAM QSQLKLFYRP KAIIRSSSDQ PERKLTAERN AGHLTLRNPT PYYITVAWLG
ADRSHRLSGF REGVMVPPLG NLPLKAVLPA ETRTLWVGYI DDYGGLQMNR YTCDALNCAF
KDAGATS
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