| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3254 |
|---|
| Symbol | |
|---|
| ID | 6483003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 3166861 |
|---|
| End bp | 3168090 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642738552 |
|---|
| Product | inner membrane transport protein YqeG |
|---|
| Protein accession | YP_002042274 |
|---|
| Protein GI | 194445152 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0814] Amino acid permeases |
|---|
| TIGRFAM ID | [TIGR00814] serine transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.0329788 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAA TTTGGTCAAA AGATGAGACT CTCTGGAGTT TTGCATTATA CGGAACGGCT
GTAGGCGCAG GCACTCTTTT CCTTCCCATC CAGTTGGGAT CGGCAGGCGC AATCGTGCTA
TTTATTACCG CGCTGGTCGC CTGGCCTCTA ACATACTGGC CGCATAAGGC GCTGTGTCAG
TTTATTCTTT CCTCAAAGAC TTCTGCCGGT GAGGGAATTA CTGGCGCCGT TACTCATTAT
TACGGCAAGA AAATCGGCAA TATTATTACC ACGCTTTATT TTATTGCGTT TTTTGTCGTG
GTATTAATTT ATGCGGTGGC GATTACCAAT TCCCTGACAG AGCAATTAGC GAAGCATATT
CAGATAGATA TTCGCATCCG GATGGCAGTT AGCTTCGGCG TAGTACTTAT CCTGAATATG
ATTTTCTTAA TGGGAAGACA TGCCACTCTT CGCGTAATGG GCTTTTTAGT CTTTCCACTT
ATCGCTTACT TCTTGTTCCT TTCGCTCTAC TTAACCGGAA GCTGGCAACC CTCGTTACTG
ACCGGGCAGA TGTCTTTGGA TAGTCACACG TTGCACCAGG TATGGATTTC TATTCCGGTG
ATGGTTTTTG CTTTTAGCCA TACGCCCATT ATTTCGACGT TTGCCATCGA CAGACGGGAA
AATTTTGGCG ATCAGGCCAT GGATAAATGC AGAAAGATCA TGAAGGTCGC CTATCTGATT
ATCTGCCTGA GCGTGCTGTT CTTTGTCTTT AGCTGCCTGC TCTCCATTCC GCCGTCATAC
ATTGAAGACG CGCGCAACGA AGGCGTTACC ATCCTTTCCG CGCTCTCGAT GATGCCCAAT
GCGCCGGCCT GGCTCTCTAT TTCCGGTATT ATCGTTGCCG TCGTGGCCAT GTCGAAATCT
TTCCTCGGCA CCTATTTCGG CGTCATTGAG GGCGCAACCG AGATGGTAAG AACCACCCTA
CAGCAGGTTG GCGTAAAAAA AAGCCGGGCG TTCAATCGCG CGCTGTCTAT CATGCTGGTT
TCCGGGATTA CGTTTATTAT TTGCTGTATT AACCCGAATG CCATCTCTAT GATTTATGCC
ATTAGCGGCC CGCTCATTGC GATGATCCTG TTTATTATGC CCACGTTGTC AACGTACCTG
ATACCGGCAT TGAAACCCTA CCGTTCAATA GGTAATTTCA TTACGTTGGT CGTCGGTTTA
CTTTGCGTAT CGGTGATGTT TTTCGGCTAA
|
|---|
| Protein sequence | MSKIWSKDET LWSFALYGTA VGAGTLFLPI QLGSAGAIVL FITALVAWPL TYWPHKALCQ
FILSSKTSAG EGITGAVTHY YGKKIGNIIT TLYFIAFFVV VLIYAVAITN SLTEQLAKHI
QIDIRIRMAV SFGVVLILNM IFLMGRHATL RVMGFLVFPL IAYFLFLSLY LTGSWQPSLL
TGQMSLDSHT LHQVWISIPV MVFAFSHTPI ISTFAIDRRE NFGDQAMDKC RKIMKVAYLI
ICLSVLFFVF SCLLSIPPSY IEDARNEGVT ILSALSMMPN APAWLSISGI IVAVVAMSKS
FLGTYFGVIE GATEMVRTTL QQVGVKKSRA FNRALSIMLV SGITFIICCI NPNAISMIYA
ISGPLIAMIL FIMPTLSTYL IPALKPYRSI GNFITLVVGL LCVSVMFFG
|
|---|
| |