| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3245 |
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| Symbol | |
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| ID | 6484451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3158413 |
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| End bp | 3159348 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642738543 |
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| Product | DNA-binding transcriptional regulator LysR |
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| Protein accession | YP_002042265 |
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| Protein GI | 194443091 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0000462598 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGCCG TTAATTTACG TCACATTGAA ATTTTTCATG CCGTAATGAC CGCCGGAAAT
CTCACCGAAG CGGCGCGGCT GCTGCATACC TCGCAGCCTA CCGTCAGTCG CGAGCTGGCG
CGTTTTGAGA AAGTGCTGGG ATTAACGCTG TTTGAGCGCA CACGCGGGCG CTTACATCCG
ACGGTGCAAG GGCTACGCCT GTTCGAAGAG GTACAACGCT CCTGGTATGG GTTGGATCGC
ATCGTCAGCG CGGCGGAAAG TCTGCGCGAG TTCCGTCAGG GCGAACTCTC TATCGCCTGC
CTGCCGGTCT TTTCACAATC CTTTTTGCCG CCGCTACTAC CGCCTTTTCT GGCACGTTAT
CCGGATGTCA GCCTGAATAT TGTGCCGCAG GAGTCGCCGT TGCTGGAAGA GTGGCTCTCC
GCTCAGCGCC ACGATTTAGG GCTGACGGAG ACGCTTCATG CCCCGGCAGG AACAACCCGT
ACCGAGTTAC TAACGCTAAA TGAAGTGTGC GTACTGCCCT GCGACCATCC GCTTGCCGCC
AAAACGGTAC TGACGCCAGA CGATTTTCAG GGGGAAAACT TTATCAGCCT CTCCCGCCTG
GACAGCTATC GACAGTTGTT GGATACGTTA TTTGCCGAAC ATCAGGTGAA GCGCAGAATG
GTGGTGGAAA CGCATAGCGC GGCCTCCGTC TGCGCGATGG TGCGCGCCGG GGCGGGCGTT
TCGATCGTTA ACCCGCTGAC CGCGCTGGAC TATGCCGCCA GCGGCGTCAC CGTCCGCCGC
TTCAGCATTG ACGTGCCCTT TACCGTCAGC CTGATTCGCC CGCTACACCG CCCTGCCTCC
GCGCTGGTTG ACGCCTTCAG TAAGCATTTA CAAACGCACC TTTCGCGCCT GGTCGAACCG
CTGGAGGTTA TTCTGGGGCC GATGACGAAA GCATAA
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| Protein sequence | MAAVNLRHIE IFHAVMTAGN LTEAARLLHT SQPTVSRELA RFEKVLGLTL FERTRGRLHP
TVQGLRLFEE VQRSWYGLDR IVSAAESLRE FRQGELSIAC LPVFSQSFLP PLLPPFLARY
PDVSLNIVPQ ESPLLEEWLS AQRHDLGLTE TLHAPAGTTR TELLTLNEVC VLPCDHPLAA
KTVLTPDDFQ GENFISLSRL DSYRQLLDTL FAEHQVKRRM VVETHSAASV CAMVRAGAGV
SIVNPLTALD YAASGVTVRR FSIDVPFTVS LIRPLHRPAS ALVDAFSKHL QTHLSRLVEP
LEVILGPMTK A
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