Gene SNSL254_A3222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3222 
SymbolrecC 
ID6485359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3137050 
End bp3140421 
Gene Length3372 bp 
Protein Length1123 aa 
Translation table11 
GC content54% 
IMG OID642738522 
Productexonuclease V subunit gamma 
Protein accessionYP_002042244 
Protein GI194442490 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.790994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.118959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAGGG TCTACCACTC CAATCGTCTG GATGTGCTGG AAGCGTTGAT GGAATTCATC 
GTCGAACGCG AGCGGCTGGA TGATCCCTTT GAACCAGAAA TGATTCTGGT ACAAAGCACG
GGTATGGCGC AGTGGCTGCA GATGACCCTT TCACAAAAGT TTGGTATTGC GGCGAATATC
GCTTTTCCGT TACCGGCGAG TTTTATCTGG GAGATGTTTG TCCGCGTGTT GCCGGATATT
CCCAAAGAAA GCGCTTTCAG CAAACAAAGC ATGAGCTGGA AACTGATGAC CTTGCTGCCG
CAGTTGCTGG ATAAGGATGA GTTTGTACTG CTGCGCCATT ATCTGACCGA CGACACCGAT
AAACGCAAAC TCTTTCAGCT TTCCGCGCGC GCCGCCGACC TGTTCGATCA GTATCTGGTT
TATCGGCCTG ACTGGCTTAC GCAGTGGGAA GCGGGAAAAA CCGTGGAAGG TCTGGGAGAG
GCGCAAAACT GGCAGGCGCC GCTGTGGAAA GCATTGGTGG AATATACCGC CGCGCTGGGG
CAGCCGCGCT GGCATCGCGC CAATCTCTAC CAACGCTTTA TTCAAACGCT GGAAAGCGCG
ACCGCCTGCC CGCCAGGGTT GCCGTCCCGC GTTTTTATTT GCGGCATTTC CGCGTTACCG
CCAGTGTATC TCAGAGCATT GCAGGCGCTG GGTAAACATA TTGAAATCCA TCTCCTTTTT
ACTAATCCGT GTCGGTATTA CTGGGGGGAT ATAAAAGACC CAGCCTGGCT GGCAAAACTC
ATGGCTCGCC AGCGTCGTCA CAGTTTTGAA GACCGTCATT TACCGTTGTT CCGTGAAAAC
CAGAATCCGG AAGCCTTATT TAACAGCGAC GGCGAACAGG ATATCGGTAA TCCGCTACTG
GCCTCATGGG GAAAACTGGG ACGGGATTAT ATCTACCTGC TATCTGAACT GGAAAACAGC
CAGGAGCTGG ATGCGTTTGT TGATATTACG CCAGATAATC TTTTGCATCG GATTCAGGCG
GATATCCTTG AACTGGAAAG CCATGCGGTG GCGGGCGTAA ATCTTGAGGA GTATTCGCGC
AGCGACAATA AGCGTCTGCT CGATCCCGAG GATAACAGCC TCTCTTTTCA CGTTTGTCAC
AGCCCGCAGC GCGAGGTGGA AATACTGCAC GATCGCCTGC TGGCGATGCT GGAAGCCGAT
CCGACACTAA CGCCGCGCGA CATTATCGTT ATGGTGGCTG ATATTGACAG CTATAGCCCG
TTTATCCAGG CGGTGTTTGG TAGCGCGCCA ACGGAGCGCT ATCTGCCTTA TGCCATTTCC
GATCGGCGGG CGCGTCAGTC ACATCCGGTG TTACAGGCAT TTATCAGCCT ACTTTCGTTA
CCGGACAGCC GCTTTGTCTC CGAGGATGTT CTGGCGTTGT TAGACGTACC GGTATTGGCT
GCCCGCTTTA CGATCAACGA AGAAGGGTTG CGTTATTTGC GCTTGTGGGT CAATGAGTCA
GGCATTCGCT GGGGAATTGA CGATGACAAC GTACGCGAGC TGGAACTTCC TGCCACGGGG
CAGCATACGT GGCAATTTGG CCTGACGCGT ATGCTGCTGG GGTATGCGAT GGAAAGCGCC
CAGGGCGAGT GGCAGTCGGT TCTGCCTTAT GACGAATCCA GCGGTCTGAT TGCTGAGCTG
GTCGGGCATC TGGCTTCGCT GCTGATGCAG CTTAATATCT GGCGGCGCGG TCTGGCGCAG
GAGCGACCGC TGGAAGAGTG GTTGCCCGTT TGTCGCGATA TGCTCAATGA TTTCTTCCTG
CCCGATGCGG ACACGGAAGC GGCAATGACA TTGATTGAAC AGCAGTGGCA GGCCATTATC
GCCGAAGGCG TCGCGGCGGA ATATGGCGAC GCGGTACCGA TTTCGCTACT GCGGGATGAA
CTGGCGCAGC GTCTGGATCA GGAACGTATT AGCCAGCGCT TCCTGGCGGG CCCCATCAAT
ATTTGTACGC TGATGCCGAT GCGTTCCATT CCGTTTAGAG TCGTTTGCCT GCTGGGAATG
AACGACGGCG TATACCCGCG CCAGCTTGCG CCGTTGGGCT TTGACCTGAT GAGCCAAAAA
CCCATGCGCG GGGATCGTAG CCGTCGCGAC GATGACCGCT ACCTGTTTCT GGAAGCGTTA
ATTTCGGCGC AGCAGACGCT GTATATCAGC TACATCGGTC GCTCCATCCA GGATAATAGC
GAACGCTTTC CCTCTGTACT GGTGCAAGAA TTGGTGGATT ACATCGGGCA AAGCCACTAT
TTGCCGGGCG ACGAAACGCT GACCTGTGAT GAGAGCGAAG CACGAGTCAA AGCGCATATT
ACGCGTCTGC ATACCCGTAT GCCTTTTGAT GCGCAAAATT ACCAACCCGG CGAACAGCAA
AGTTATGCCA GAGAGTGGTT GCCTGCGGCG AGTCAGTCGG GGAAAGCGCA TTCTGACTTT
GTGCAGCCGC TTCCTTTTAC GATGCCGGAA ACATTGACTC TGGAAAGTCT GCAGCGTTTT
TGGGCCCATC CGGTACGCGC ATTTTTTCAG ATGCGGCTTC AGGTTAATTT CCGCTCGGAA
GAGAGTGAGA TTCCTGATGC GGAACCGTTT GAATTAGAGG GATTGACGCG ATATCAACTT
AACCAACAGT TGCTCAATAC GCTGGTTGAA GAGGACGACG CCGAACGCTT GTTCCGCCGT
TTCCGGGCTG CGGGAGAGTT GCCTTACGGC GCGTTTGGCG AAATATTCTG GGATGCGCAA
TGTCAGGAGA TGCAGCAACT GGCAAGCCGG GTTATCGCCT GTCGTAAGCC GAGCCAAAGC
CTGGAAGTGG ATCTGCTTTG CAATGGCGTT CAGCTAACCG GCTGGCTACC GCAGGTACAG
GAGGATGGAT TATTGCGCTG GCGTCCCGCT TTAATCAGCG TGGCGCAAGG TGTGAAACTT
TGGCTGGAAC ACCTTGTCTA TTGTGCCAGC GGCGGGAGTG GCGAAAGTCG TCTGTTTTTG
CGCAAAGAGG GAGAATGGCG ATTTCCGCCA CTTGATAAAG CGCAGGCAAT GGCTTACCTG
GCGCAACTGA TTGAAGGCTA CCGGGAAGGC ATGTCTTCTC CGCTATTGGT ACTGCCGGAA
AGCGGCGGCG CATGGATAAA AGCCTGTTAT GACGCTGAAA ATGATGTCAT GTTAGACGAC
GATGACACCT TACAGAAGGC CAGAACAAAG TTTCTACAGG CTTATGAAGG CAACATGATG
GTGAGCGGCG AAGGCGAAGA TATCTGGTAT CAACGTCTTT GGCGTCAGCT GGAATCTGAA
ACGTTGCAGG CTATCATTGC GCAGTCCCGA CATTACCTGT TACCGCTGTT TCGTTTTAAT
CAGTCTCGTT GA
 
Protein sequence
MLRVYHSNRL DVLEALMEFI VERERLDDPF EPEMILVQST GMAQWLQMTL SQKFGIAANI 
AFPLPASFIW EMFVRVLPDI PKESAFSKQS MSWKLMTLLP QLLDKDEFVL LRHYLTDDTD
KRKLFQLSAR AADLFDQYLV YRPDWLTQWE AGKTVEGLGE AQNWQAPLWK ALVEYTAALG
QPRWHRANLY QRFIQTLESA TACPPGLPSR VFICGISALP PVYLRALQAL GKHIEIHLLF
TNPCRYYWGD IKDPAWLAKL MARQRRHSFE DRHLPLFREN QNPEALFNSD GEQDIGNPLL
ASWGKLGRDY IYLLSELENS QELDAFVDIT PDNLLHRIQA DILELESHAV AGVNLEEYSR
SDNKRLLDPE DNSLSFHVCH SPQREVEILH DRLLAMLEAD PTLTPRDIIV MVADIDSYSP
FIQAVFGSAP TERYLPYAIS DRRARQSHPV LQAFISLLSL PDSRFVSEDV LALLDVPVLA
ARFTINEEGL RYLRLWVNES GIRWGIDDDN VRELELPATG QHTWQFGLTR MLLGYAMESA
QGEWQSVLPY DESSGLIAEL VGHLASLLMQ LNIWRRGLAQ ERPLEEWLPV CRDMLNDFFL
PDADTEAAMT LIEQQWQAII AEGVAAEYGD AVPISLLRDE LAQRLDQERI SQRFLAGPIN
ICTLMPMRSI PFRVVCLLGM NDGVYPRQLA PLGFDLMSQK PMRGDRSRRD DDRYLFLEAL
ISAQQTLYIS YIGRSIQDNS ERFPSVLVQE LVDYIGQSHY LPGDETLTCD ESEARVKAHI
TRLHTRMPFD AQNYQPGEQQ SYAREWLPAA SQSGKAHSDF VQPLPFTMPE TLTLESLQRF
WAHPVRAFFQ MRLQVNFRSE ESEIPDAEPF ELEGLTRYQL NQQLLNTLVE EDDAERLFRR
FRAAGELPYG AFGEIFWDAQ CQEMQQLASR VIACRKPSQS LEVDLLCNGV QLTGWLPQVQ
EDGLLRWRPA LISVAQGVKL WLEHLVYCAS GGSGESRLFL RKEGEWRFPP LDKAQAMAYL
AQLIEGYREG MSSPLLVLPE SGGAWIKACY DAENDVMLDD DDTLQKARTK FLQAYEGNMM
VSGEGEDIWY QRLWRQLESE TLQAIIAQSR HYLLPLFRFN QSR