| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3219 |
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| Symbol | recD |
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| ID | 6484480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3128614 |
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| End bp | 3130449 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642738519 |
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| Product | exonuclease V subunit alpha |
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| Protein accession | YP_002042241 |
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| Protein GI | 194444319 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATCC AGGAGCGGTT GCTGGAGGCC GTTGAACAAA AACTATTACG GCCCATTGAT
GCCCAGTTTG CTTTAACCGT CGCCGGTAAC GACGATCCCG CCGTGACGCT GGCGGCAGCG
CTGCTTAGTC ATGACGCAGG TGAAGGTCAC GTGTGTCTGC CGTTGTCGCG TTTAACGTTA
ACGGAGGAGG CGCATCCCTT ACTGGTCGCC TGGATAAGCG AAACGCCTAC GCCAATCGAC
TGGAAAAAGC GGTTACTGGC GTCTGCGGCG GTTAGCTGCG GCGATAGCCC CGCGCCGTTA
ATTCTGTGCG GCGATCGTCT CTACCTGAAT CGCATGTGGT GCAACGAACG TACGGTTGCG
CGCTTTTTTA ACGAGGTTAA CCAGGCCATC GCCGTAGATG AAGATCAGTT ATCCCGTATT
CTGGACGCGC TATTCCCTCC GACAGACGAG GTGAACTGGC AAAAGGTGGC CGCCGCCGTA
GCGCTAACTC GCCGTATCTC CGTGATTTCA GGCGGTCCCG GCACCGGTAA AACCACCACC
GTCGCGAAGC TGCTGGCGGC ATTAATTCAA ATGGCGGATG GCGAACGTTG CCGTATCCGG
CTGGCAGCGC CGACCGGGAA AGCGGCCGCA CGCCTGACGG AGTCGCTCGG CGCGGCGTTG
CGTCAGCTTC CACTTACCGA TGCGCAGAAA AAGCGTATAC CGGAGGACGC CAGTACGCTG
CACCGACTGC TGGGCGCACA GCCCGGCAGC CAGCGATTAC GCCATCATGC GGGCAACCCG
CTGCATCTGG ACGTGCTGGT GGTCGATGAA GCATCAATGA TTGATTTGCC GATGATGTCA
CGTTTGATTG ACGCTCTGCC GCCGCACGGG CGGGTCATTT TTCTTGGCGA TCGCGATCAG
TTGGCATCCG TTGAGGCGGG CGCTGTGTTG GGCGATATTT GCGCCTATGT CAACGCAGGG
TTTACGGCGG AACGCGCCCG ACAGCTAAGT CGACTAACAG GGAGCGCCAT TCCGGCGGGG
GCCGGAACGC AAGCCGCGTC TTTACGCGAT AGCCTCTGTT TGTTGCAAAA GAGCTACCGT
TTCGGCAGCG ATTCTGGCAT CGGCAAGCTG GCGGCGGCGA TTAACTGCGG CGACAGGTCG
GCAATCCAGG CTGTTTTTCA GCAGGGGTTT AGCGATATAG AGAAGCGTAC ATTGCAAAGT
AGCGACGATT ATGCCGGGAT GCTGGATGAA GCGCTGGCGG GCTATGGTCG CTACCTGCGG
TTGCTGCATG AAAAAGCAAC GCCGGAGGCA ATCCTTCAGG CTTTCAATGA GTATCAACTG
CTTTGCGCGC TGCGCGAAGG CCCATTTGGC GTGAGGGGAC TGAATGACCG CATTGAGCAG
GCGATGGTGC AGCAACGAAA AATTCAGCGG CATCCGCACT CTCGCTGGTA TGAAGGGCGT
CCGGTAATGA TTGCGCGCAA CGATAGCGCG TTGGGGCTAT TTAACGGCGA TATTGGTATT
GCGCTCGATC GCGGACAGGG GTTACGCGTC TGGTTTGTGA TGCCGGACGG CACCATCAAG
TCCGTTCAGC CCAGCCGTCT GCCGGAACAT GATACAACCT GGGCGATGAC GGTACATAAA
TCACAGGGGT CTGAATTTGA TCACGCCGCG CTGATTTTAC CCAGCCAGCG TTCGCCGGTC
GTGACGCGGG AGCTGGTGTA TACCGCTGTT ACGCGGGCGC GGCGGCGGTT ATCGCTGTAT
GCCGATGAAC GGATCCTGGC AGGCGCGATT GTGACGCGTA CGGAACGGCG CAGCGGGTTA
GCCACCTTAT TTGATGAAGT CAGTCGTACC GGATAA
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| Protein sequence | MTIQERLLEA VEQKLLRPID AQFALTVAGN DDPAVTLAAA LLSHDAGEGH VCLPLSRLTL
TEEAHPLLVA WISETPTPID WKKRLLASAA VSCGDSPAPL ILCGDRLYLN RMWCNERTVA
RFFNEVNQAI AVDEDQLSRI LDALFPPTDE VNWQKVAAAV ALTRRISVIS GGPGTGKTTT
VAKLLAALIQ MADGERCRIR LAAPTGKAAA RLTESLGAAL RQLPLTDAQK KRIPEDASTL
HRLLGAQPGS QRLRHHAGNP LHLDVLVVDE ASMIDLPMMS RLIDALPPHG RVIFLGDRDQ
LASVEAGAVL GDICAYVNAG FTAERARQLS RLTGSAIPAG AGTQAASLRD SLCLLQKSYR
FGSDSGIGKL AAAINCGDRS AIQAVFQQGF SDIEKRTLQS SDDYAGMLDE ALAGYGRYLR
LLHEKATPEA ILQAFNEYQL LCALREGPFG VRGLNDRIEQ AMVQQRKIQR HPHSRWYEGR
PVMIARNDSA LGLFNGDIGI ALDRGQGLRV WFVMPDGTIK SVQPSRLPEH DTTWAMTVHK
SQGSEFDHAA LILPSQRSPV VTRELVYTAV TRARRRLSLY ADERILAGAI VTRTERRSGL
ATLFDEVSRT G
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