Gene SNSL254_A3211 details

Gene Information

• Locus tag: SNSL254_A3211
• Symbol: csdE
• ID: 6483487
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Newport str. SL254
• Kingdom: Bacteria
• Replicon accession: NC_011080
• Strand: +
• Start bp: 3121499
• End bp: 3121942
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 642738513
• Product: cysteine desulfurase, sulfur acceptor subunit CsdE
• Protein accession: YP_002042237
• Protein GI: 194444454
• COG category: [R] General function prediction only
• COG ID: [COG2166] SufE protein probably involved in Fe-S center assembly
• TIGRFAM ID: [TIGR03391] cysteine desulfurase, sulfur acceptor subunit CsdE

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.416029
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 89
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACAAACC CTCTTTATAC CGGACACCCG TTCGGCACAA CGGTAACGGA AGAGACGTTA 
CGCGCTATCT TTCTCCCGCT GACCCAGTGG GAGGATAAAT ATCGTCAGTT GATTCTGTTA 
GGAAAACAGC TCCCCGCTCT GCCGGATGAA TGCAAAGCGC AGGCGAAAGA GATAGCCGGC 
TGCGAGAACC GCGTCTGGCT GGGCTTTACC CGATCAGATA ACGGAACGAT GCACTTTTTC 
GGCGACAGTG AGGGGCGGAT TGTCCGCGGC CTGCTGGCGG TATTGCTCAC CGCGGTGGAA 
GGAAAAAACG CCGCCGAGTT GCAGGCTCGT TCACCGCTGG CGCTGTTTGA TGAGCTGGGT 
TTACGCGCCC AGCTTAGCGC CTCACGTAGT CAGGGGCTGA ACGCGCTGAG CGAAGCGATT 
GTTGCCGCAA CGCATAAGCG TTGA 

 

Protein sequence

MTNPLYTGHP FGTTVTEETL RAIFLPLTQW EDKYRQLILL GKQLPALPDE CKAQAKEIAG 
CENRVWLGFT RSDNGTMHFF GDSEGRIVRG LLAVLLTAVE GKNAAELQAR SPLALFDELG 
LRAQLSASRS QGLNALSEAI VAATHKR