Gene SNSL254_A3203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3203 
Symbol 
ID6484148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3115854 
End bp3116276 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content54% 
IMG OID642738506 
Productfuscose operon FucU protein 
Protein accessionYP_002042230 
Protein GI194443484 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4154] Fucose dissimilation pathway protein FucU 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.766315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAA CCATTTCACC GTTAATTTCC CCGACACTGC TCAAAGTGCT GGCCGAGATG 
GGCCACGGGG ACGAAATCAT TTTTTCCGAC GCTCACTTTC CCGCGCATAG CCTGGGCCCG
CAGGTGATTC GCGCCGATGG TCTTAGCGTC AGCGATCTAC TGCGGGCAAT TATTCCGCTC
TTTGAGCTGG ATAGCTACGC CCCGCCGCTG GTGATGATGG CCGCCGTGGA AGGCGACACG
CTCGATCCCA GCGTTGAAGC GCGCTATCGC GATGCTTTGT CATTAGAAGC GCCGTGCCCG
GATATCGTTC GTATCGACCG CTATGCGTTT TATGAGCGGG CGCAAAAAGC GTTTGCGATC
GTTATCACAG GTGAGTGCGC GAAGTACGGA AATATTCTTT TAAAAAAAGG GGTAACGCCG
TAA
 
Protein sequence
MLKTISPLIS PTLLKVLAEM GHGDEIIFSD AHFPAHSLGP QVIRADGLSV SDLLRAIIPL 
FELDSYAPPL VMMAAVEGDT LDPSVEARYR DALSLEAPCP DIVRIDRYAF YERAQKAFAI
VITGECAKYG NILLKKGVTP