Gene SNSL254_A3195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3195 
Symbolxni 
ID6483878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3107995 
End bp3108750 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content56% 
IMG OID642738498 
Productexonuclease IX 
Protein accessionYP_002042222 
Protein GI194445551 
COG category[L] Replication, recombination and repair 
COG ID[COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.926983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGCTC ATCTGCTTAT CGTCGACGCG CTCAATTTGA TTCGCCGTAT TCACGCCGTT 
CAGGGATCGC CCTGTGTGGA AACCTGCCAA CACGCGCTCG ATCAATTGAT TATCCACAGC
CAGCCAACCC ATGCCGTAGC GGTATTTGAT GACGACGCGC GCAGCAGCGG CTGGCGTCAT
CAGCGTTTAC CGGACTACAA AGCAGGACGT CCGCCGATGC CTGACGATTT ACATAATGAA
ATGCCCGCCC TACGCGCCGC GTTTGAACAG CGCGGCGTAC GCTGTTGGGC ATCAGATGGT
AACGAAGCGG ACGATCTGGC GGCGACGCTG GCGCTAAAAG TTACCGAAGC CGGACACCAG
GCAACCATTG TGTCAACCGA TAAAGGCTAT TGCCAGTTGC TCTCTCCGGG ATTGCGCATT
CGCGACTACT TCCAGAAACG CTGGCTGGAC GCGCCGTTTA TTGAAAAAGA GTTTGGCGTA
CTCCCCCGGC AGTTGCCGGA TTACTGGGGG CTGGCAGGAA TCAGCAGTTC GAAAGTCCCC
GGCGTTGCCG GTATCGGCCC CAAAAGCGCG ACCCAGCTAT TGATTCAGTT TCAAAATCTG
GAGGGAATTT ACGCCCATCC GGACGAGGTG CCGGAAAAGT GGCGCAAAAA GCTTGAGACG
CATAAAGAAA TGGCATTTCT CTGCCGCGAT ATTGCACGTC TGCAAACCGA TTTACATATT
GACGGAAACT TACAGCAGCT ACGGCTGGCG CGGTAG
 
Protein sequence
MAAHLLIVDA LNLIRRIHAV QGSPCVETCQ HALDQLIIHS QPTHAVAVFD DDARSSGWRH 
QRLPDYKAGR PPMPDDLHNE MPALRAAFEQ RGVRCWASDG NEADDLAATL ALKVTEAGHQ
ATIVSTDKGY CQLLSPGLRI RDYFQKRWLD APFIEKEFGV LPRQLPDYWG LAGISSSKVP
GVAGIGPKSA TQLLIQFQNL EGIYAHPDEV PEKWRKKLET HKEMAFLCRD IARLQTDLHI
DGNLQQLRLA R