Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3195 |
Symbol | xni |
ID | 6483878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3107995 |
End bp | 3108750 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642738498 |
Product | exonuclease IX |
Protein accession | YP_002042222 |
Protein GI | 194445551 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.926983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGCTC ATCTGCTTAT CGTCGACGCG CTCAATTTGA TTCGCCGTAT TCACGCCGTT CAGGGATCGC CCTGTGTGGA AACCTGCCAA CACGCGCTCG ATCAATTGAT TATCCACAGC CAGCCAACCC ATGCCGTAGC GGTATTTGAT GACGACGCGC GCAGCAGCGG CTGGCGTCAT CAGCGTTTAC CGGACTACAA AGCAGGACGT CCGCCGATGC CTGACGATTT ACATAATGAA ATGCCCGCCC TACGCGCCGC GTTTGAACAG CGCGGCGTAC GCTGTTGGGC ATCAGATGGT AACGAAGCGG ACGATCTGGC GGCGACGCTG GCGCTAAAAG TTACCGAAGC CGGACACCAG GCAACCATTG TGTCAACCGA TAAAGGCTAT TGCCAGTTGC TCTCTCCGGG ATTGCGCATT CGCGACTACT TCCAGAAACG CTGGCTGGAC GCGCCGTTTA TTGAAAAAGA GTTTGGCGTA CTCCCCCGGC AGTTGCCGGA TTACTGGGGG CTGGCAGGAA TCAGCAGTTC GAAAGTCCCC GGCGTTGCCG GTATCGGCCC CAAAAGCGCG ACCCAGCTAT TGATTCAGTT TCAAAATCTG GAGGGAATTT ACGCCCATCC GGACGAGGTG CCGGAAAAGT GGCGCAAAAA GCTTGAGACG CATAAAGAAA TGGCATTTCT CTGCCGCGAT ATTGCACGTC TGCAAACCGA TTTACATATT GACGGAAACT TACAGCAGCT ACGGCTGGCG CGGTAG
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Protein sequence | MAAHLLIVDA LNLIRRIHAV QGSPCVETCQ HALDQLIIHS QPTHAVAVFD DDARSSGWRH QRLPDYKAGR PPMPDDLHNE MPALRAAFEQ RGVRCWASDG NEADDLAATL ALKVTEAGHQ ATIVSTDKGY CQLLSPGLRI RDYFQKRWLD APFIEKEFGV LPRQLPDYWG LAGISSSKVP GVAGIGPKSA TQLLIQFQNL EGIYAHPDEV PEKWRKKLET HKEMAFLCRD IARLQTDLHI DGNLQQLRLA R
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