Gene SNSL254_A3194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3194 
Symbol 
ID6486604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3106458 
End bp3107825 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content56% 
IMG OID642738497 
ProductL-serine ammonia-lyase 
Protein accessionYP_002042221 
Protein GI194443885 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.500891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGCG TATTCGATAT TTTTAAAATC GGCATTGGCC CTTCCAGTTC TCACACCGTC 
GGACCAATGA AAGCAGGCAA GCAGTTCACG GACGATCTGA TTGCCCGCCA TATCCTTACA
GATGTCACCC GCGTCGTGGT GGATGTCTAC GGCTCTCTGT CATTGACGGG TAAAGGCCAC
CACACTGATA TCGCCATTAT TATGGGCCTG GCGGGGAATC TGCCGGACAC CGTCGATATC
GACGCCATTC CGTCCTTTAT CCAGGATGTG AACACCCATG GGCGTTTACT ACTGGCCAAT
GGGCAGCATG AAGTCGAATT TCCGGTCGAT AAGTGCATGA ATTTCCACGC CGACAACCTG
TCTCTGCATG AGAACGGGAT GCGTATTACC GCGCTGGCGG GCGATAAAGT GCTCTACAGC
CAAACCTACT ACTCCATTGG CGGCGGCTTT ATCGTCGATG AAGAGCACTT TGGTTTGACG
AATAGCGAAC CCGTTAACGT ACCATATCCT TATAAAACCG CCGCGGATTT ACAGCGCCAT
TGCCAGGAGA CGGGTCTGTC GCTCTCCGGT CTGATGATGC AAAACGAACT GGCTCTGCAC
AGTAAAGAAG CGCTGGAGCA GCACTTCGCC AGGGTCTGGG AGGTGATGCG CAGCGGTATT
GAGCGCGGTA TCACCACCGA GGGCGTATTG CCGGGCAAAC TGCGCGTTCC GCGTCGCGCG
GCGGCGCTGC GTCGGATGCT GGTCAGTCAG GATAAGACCA CCACCGATCC GATGGCGGTC
GTCGACTGGA TCAATATGTT CGCTCTGGCG GTGAACGAAG AGAATGCCGC AGGCGGACGA
GTAGTCACTG CCCCGACTAA CGGCGCATGT GGTATTGTTC CGGCGGTGCT GGCGTACTAT
GACAAGTTTA TCCGCGAAGT AAATGCTAAC TCGCTTGCTC GCTATATGCT GGTCGCCAGC
GCGATTGGCT CGCTGTATAA GATGAACGCC TCTATTTCCG GCGCCGAAGT GGGTTGTCAG
GGAGAGGTCG GCGTGGCCTG TTCCATGGCG GCAGCGGGTC TGGCCGAGCT GCTGGGCGGT
AGCCCGGCGC AGGTGTGCAT CGCCGCAGAA ATCGCCATGG AGCATAATCT GGGGTTAACT
TGCGATCCGG TTGCCGGCCA GGTCCAGGTT CCCTGCATTG AGCGTAACGC GATTGCTTCA
GTCAAAGCGG TCAACGCCGC GCGTATGGCG CTGCGCCGTA CCAGCGAACC GCGTGTATGC
CTCGATAAAG TGATTGAGAC CATGTACGAA ACCGGTAAAG ACATGAACGC TAAGTACCGC
GAAACTTCGC GCGGCGGCCT GGCGATGAAG ATCGTTACCT GCGATTAA
 
Protein sequence
MISVFDIFKI GIGPSSSHTV GPMKAGKQFT DDLIARHILT DVTRVVVDVY GSLSLTGKGH 
HTDIAIIMGL AGNLPDTVDI DAIPSFIQDV NTHGRLLLAN GQHEVEFPVD KCMNFHADNL
SLHENGMRIT ALAGDKVLYS QTYYSIGGGF IVDEEHFGLT NSEPVNVPYP YKTAADLQRH
CQETGLSLSG LMMQNELALH SKEALEQHFA RVWEVMRSGI ERGITTEGVL PGKLRVPRRA
AALRRMLVSQ DKTTTDPMAV VDWINMFALA VNEENAAGGR VVTAPTNGAC GIVPAVLAYY
DKFIREVNAN SLARYMLVAS AIGSLYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELLGG
SPAQVCIAAE IAMEHNLGLT CDPVAGQVQV PCIERNAIAS VKAVNAARMA LRRTSEPRVC
LDKVIETMYE TGKDMNAKYR ETSRGGLAMK IVTCD