Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3193 |
Symbol | |
ID | 6485819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3105110 |
End bp | 3106399 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642738496 |
Product | serine transporter family protein |
Protein accession | YP_002042220 |
Protein GI | 194446530 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.472945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAACCA CTCAGACCAG CACGATTGCT TCGATTGACT CTCGAAGCGC ATGGCGCAAA ACGGATACCA TGTGGATGCT GGGCCTTTAC GGCACGGCAA TCGGCGCGGG CGTTCTGTTC CTGCCGATCA ACGCAGGCGT CGGCGGCATG ATTCCGCTCA TCATCATGGC GATTCTCGCT TTCCCGATGA CCTTTTTCGC ACACCGTGGT TTAACCCGCT TCGTGCTGTC CGGTAAAAAC CCGGGTGAAG ACATCACTGA AGTCGTTGAG GAACACTTCG GTATCGGCGC AGGTAAACTG ATTACCCTGC TCTACTTCTT CGCGATTTAC CCCATCCTGC TGGTTTACAG CGTGGCGATT ACTAATACCG TGGAAAGCTT CCTGACCCAC CAGTTAGCGA TTAATCCGCC GCCGCGGGCG ATTCTTTCAC TGATCCTGAT TGTTGGCATG ATGACCATCG TGCGCTTCGG CGAGCAAATG ATCGTTAAGG CGATGAGTAT CCTGGTATTC CCGTTCGTCG CTGCGCTGAT GCTGCTGGCC TTGTACCTGA TCCCGCAGTG GAACGGCGCG GCGCTGGAAA CGCTGTCCTT TGATTCCGCC GCGTCTACCG GCAACGGTCT GTGGATGACG CTGTGGCTGG CGATTCCGGT GATGGTTTTC TCTTTCAACC ACTCCCCGAT CATCTCCTCC TTCGCGGTTG CGAAGCGTGA AGAGTACGGT GAAGGCGCAG AGAAGAAATG TTCTAAAATT CTGGCCTTCG CCCACATCAT GATGGTGCTG ACCGTGATGT TCTTCGTCTT CAGCTGCGTG CTGAGCCTGA CGCCGGCGGA TCTGGCAGCG GCAAAAGAGC AGAACATCTC TATTCTGTCT TACCTGGCGA ACCACTTTAA CGCGCCGATC ATCGCCTGGA TGGCGCCGAT CATTGCGATG ATTGCTATCA CCAAATCTTT CCTCGGCCAC TACCTGGGCG CGCGTGAAGG CTTTAACGGG ATGGTGATTA AATCGCTGCG TGGTAAAGGT AAATCCATCG AAATCAACAA ACTGAATAAA ATTACCGCGC TGTTCATGCT GGTCACCACC TGGATTGTGG CGACGCTGAA CCCCAGCATC CTGGGCATGA TTGAAACCCT GGGCGGCCCG ATCATCGCGA TGATTCTGTT CCTGATGCCG ATGTATGCCA TCCAGAAAGT ACCGGCAATG CGTAAGTACA GCGGTCATAT CAGCAACGTA TTCGTTGTGA TTATGGGCCT GATTGCCATC TCCGCTATTT TCTACTCACT GTTCAGCTAA
|
Protein sequence | METTQTSTIA SIDSRSAWRK TDTMWMLGLY GTAIGAGVLF LPINAGVGGM IPLIIMAILA FPMTFFAHRG LTRFVLSGKN PGEDITEVVE EHFGIGAGKL ITLLYFFAIY PILLVYSVAI TNTVESFLTH QLAINPPPRA ILSLILIVGM MTIVRFGEQM IVKAMSILVF PFVAALMLLA LYLIPQWNGA ALETLSFDSA ASTGNGLWMT LWLAIPVMVF SFNHSPIISS FAVAKREEYG EGAEKKCSKI LAFAHIMMVL TVMFFVFSCV LSLTPADLAA AKEQNISILS YLANHFNAPI IAWMAPIIAM IAITKSFLGH YLGAREGFNG MVIKSLRGKG KSIEINKLNK ITALFMLVTT WIVATLNPSI LGMIETLGGP IIAMILFLMP MYAIQKVPAM RKYSGHISNV FVVIMGLIAI SAIFYSLFS
|
| |