Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3184 |
Symbol | gudP |
ID | 6483301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3097576 |
End bp | 3098934 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642738489 |
Product | glucarate permease |
Protein accession | YP_002042213 |
Protein GI | 194444468 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 0.513823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCAT TAAGTCACGC GGCGAGCAGT GCGGAGAAAC GCACGAACGC CCGCTACTGG ATAGTGGTGA TGCTGTTTAT CGTCACATCC TTCAACTACG GCGACCGCGC CACATTGTCC ATTGCCGGCT CAGAAATGGC CAAAGATATC GGCCTTGATC CGGTAGGCAT GGGCTATGTT TTTTCTGCTT TTTCATGGGC CTATGTTATC GGGCAGATCC CGGGCGGCTG GCTGCTGGAC CGCTTTGGTT CCAAACGCGT CTATTTCTGG TCTATTTTCA TTTGGTCAGT CTTCACCCTG TTGCAGGGTT TTGTCGATAT CTTTAGTGGT TTCGGCATTA TTGTCGCCCT CTTTACGCTT CGTTTCCTGG TTGGTCTGGC GGAATCGCCT TCTTTCCCGG GCAACAGTCG CATTGTTGCA GCCTGGTTCC CGGCGCAGGA GAGGGGAACG GCGGTGGCCA TCTTTAACTC CGCGCAATAC TTTGCCACGG TTATTTTCGC GCCGATTATG GGCTGGCTGA CGCACGAAGT GGGCTGGTCG CATGTCTTCT TCTTTATGGG CGGGTTAGGG ATCATCATCA GCTTTATCTG GTTGAAAGTT ATCCATGAAC CAAATAACCA TCCGGGCGTA AATAAGAAAG AATTGGAGTA CATCGCAGAA GGCGGCGCGC TGATCAATAT GGATCAGAAA GACACCAAAG CGAAAGTACC GTTTAGCGTC AAATGGGGCC AGATCAAACA GCTGCTGGGC TCTCGTATGA TGATTGGCGT TTACATCGGT CAGTACTGTA TTAACGCATT GACCTATTTC TTTATTACCT GGTTCCCGGT CTATTTGGTC CAGGCGCGCG GCATGTCGAT TCTCAAAGCG GGCTTTGTCG CCTCGGTTCC TGCGGTCTGC GGCTTTATCG GCGGCGTGTT GGGCGGCATC ATTTCCGACT GGCTGATGCG TCGTACTGGC TCCCTGAATA TCGCGCGCAA GACGCCGATT GTGCTGGGAA TGTTGCTGTC AATGGTTATG GTGTTCTGTA ACTATGTGAA CGTGGAATGG ATGATCATTG GCTTTATGGC GTTGGCCTTC TTCGGTAAAG GTATCGGCGC GTTGGGCTGG GCAGTAATGG CGGATACTGC GCCGAAAGAG ATCAGCGGTC TTTCCGGCGG CTTGTTTAAT ATGTTCGGCA ATATCTCCGG TATTGTGACG CCAATCGCGA TTGGTTACAT CGTTGGCACC ACCGGTTCCT TCAACGGCGC GTTGATCTAT GTCGGCGTAC ATGCCCTGGT GGCCATCATC AGCTATCTGG TGCTGGTAGG TGATATTAAG CGTATTGAAC TGAAACCTGT CGCAGGACAA TTATCATGA
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Protein sequence | MSSLSHAASS AEKRTNARYW IVVMLFIVTS FNYGDRATLS IAGSEMAKDI GLDPVGMGYV FSAFSWAYVI GQIPGGWLLD RFGSKRVYFW SIFIWSVFTL LQGFVDIFSG FGIIVALFTL RFLVGLAESP SFPGNSRIVA AWFPAQERGT AVAIFNSAQY FATVIFAPIM GWLTHEVGWS HVFFFMGGLG IIISFIWLKV IHEPNNHPGV NKKELEYIAE GGALINMDQK DTKAKVPFSV KWGQIKQLLG SRMMIGVYIG QYCINALTYF FITWFPVYLV QARGMSILKA GFVASVPAVC GFIGGVLGGI ISDWLMRRTG SLNIARKTPI VLGMLLSMVM VFCNYVNVEW MIIGFMALAF FGKGIGALGW AVMADTAPKE ISGLSGGLFN MFGNISGIVT PIAIGYIVGT TGSFNGALIY VGVHALVAII SYLVLVGDIK RIELKPVAGQ LS
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