| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3183 |
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| Symbol | |
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| ID | 6483889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3096239 |
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| End bp | 3097579 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642738488 |
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| Product | glucarate dehydratase |
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| Protein accession | YP_002042212 |
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| Protein GI | 194443156 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.558486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACGC AATCTAGTCC CGTTATTACG GACATGAAGG TCATTCCGGT TGCCGGACAT
GACAGTATGC TACTCAACAT CGGCGGCGCG CATAACGCGT ACTTCACCCG TAACATCGTC
GTCCTCACCG ATAACGCCGG GCATACTGGC GTCGGCGAGG CGCCGGGCGG AGAAGTGATT
TATCAGACGC TGGTCGATGC TATTCCGATG GTATTAGGCC AGGAAGTCGC CCGCCTGAAC
AAAGTGGTGC AGCAGGTGCA TAAAGGCAAC CAGGCCGCTG ATTTTGACAC CTTTGGCAAA
GGCGCATGGA CGTTTGAACT GCGGGTTAAC GCGGTGGCGG CTTTGGAAGC GGCGCTGCTT
GATCTACTGG GACAGGCGCT TAATGTGCCG GTCTGTGAAC TGTTAGGGCC AGGTAAACAG
CGCGATGCCG TCACCGTGTT GGGCTATCTC TTCTATATTG GCGATCGCAC TAAAACCGAT
CTGCCGTATC TGGAAAGCAC GCCGGGCAGT CATGAATGGT ATCGTCTGCG CCATCAGGAA
GCGCTGAACA GCGACGCGGT CGTGCGGCTG GCGGAAGCGT CTCAGGATCG CTACGGCTTT
AAAGATTTTA AACTCAAGGG CGGCGTGCTA CCGGGCGAAC AAGAGATTGA TACCGTTCGC
GCGCTAAAAA AACGCTTCCC GGACGCGCGT ATTACCGTGG ATCCGAACGG CGCCTGGCTA
CTGGATGAAG CCATTGCGTT GTGCAAAGGG CTGAAAGATG TACTGACCTA CGCGGAAGAT
CCGTGCGGCG CGGAGCAAGG ATTCTCTGGT CGTGAAGTCA TGGCGGAGTT CCGCCGCGCG
ACAGGACTGC CGGTGGCGAC CAATATGATT GCCACCAACT GGCGCGAAAT GGGGCATGCA
GTGATGCTCA ACGCGGTAGA TATTCCTCTT GCCGACCCGC ATTTCTGGAC TCTCACCGGC
GCCGTTCGCG TGGCGCAACT GTGCGATGAC TGGGGGCTAA CCTGGGGCTG CCATTCGAAT
AACCATTTTG ATATTTCACT GGCGATGTTT ACCCATGTCG GCGCGGCGGC GCCAGGCAAA
CCCACCGCTA TTGATACGCA CTGGATCTGG CAGGAGGGCG ATTGCCGCCT GACTAAAAAT
CCGCTGGAAA TTAAAAACGG CAAAATTGCC GTTCCGGATG CGCCAGGACT GGGCGTGGAG
CTTGACTGGG AACAGGTGCG AAAAGCGCAT GACGCGTATA AAAAGCTGCC AGGCGGCGCG
CGTAATGATG CAGGCCCGAT GCAATACCTG ATCCCCGGCT GGACTTTTGA CCGCAAACGC
CCTGTTTTTG GTCGTCACTA A
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| Protein sequence | MTTQSSPVIT DMKVIPVAGH DSMLLNIGGA HNAYFTRNIV VLTDNAGHTG VGEAPGGEVI
YQTLVDAIPM VLGQEVARLN KVVQQVHKGN QAADFDTFGK GAWTFELRVN AVAALEAALL
DLLGQALNVP VCELLGPGKQ RDAVTVLGYL FYIGDRTKTD LPYLESTPGS HEWYRLRHQE
ALNSDAVVRL AEASQDRYGF KDFKLKGGVL PGEQEIDTVR ALKKRFPDAR ITVDPNGAWL
LDEAIALCKG LKDVLTYAED PCGAEQGFSG REVMAEFRRA TGLPVATNMI ATNWREMGHA
VMLNAVDIPL ADPHFWTLTG AVRVAQLCDD WGLTWGCHSN NHFDISLAMF THVGAAAPGK
PTAIDTHWIW QEGDCRLTKN PLEIKNGKIA VPDAPGLGVE LDWEQVRKAH DAYKKLPGGA
RNDAGPMQYL IPGWTFDRKR PVFGRH
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