Gene SNSL254_A3181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3181 
Symbol 
ID6484656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3093658 
End bp3094800 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content58% 
IMG OID642738486 
Productglycerate kinase 2 
Protein accessionYP_002042210 
Protein GI194444277 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1929] Glycerate kinase 
TIGRFAM ID[TIGR00045] glycerate kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.345716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.43286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG TGATCGCACC AGACTCGTAT AAGGAAAGTT TGAGTGCTCT TGAGGTAGCG 
ACCGCCATTG AACAAGGATT TCGCGAGATC TGGCCTGACG CCGATTACCT GAAATTGCCG
CTGGCTGATG GCGGAGAAGG TACTGTCGAA GCGATGGTTG AAGCGACGGC GGGTCGAATC
GTGCATGTTG AGGTCACCGG GCCGTTGGGG CATCGCGTCA ATGCGTTTTA TGGGCTTTCC
GGCGATGCGC GTTCCGCGTT CATTGAAATG GCGGCCGCCA GCGGGCTGGA GCAGGTGCCG
CCCGCGCAAC GCGATCCGCT GAAGACCACG TCATGGGGAA CCGGCGAGCT GATCCGTCAT
GCGCTGGATG CGGGCGTTGA GCATATCATT ATTGGTATCG GCGGTAGCGC CACCAACGAT
GGTGGCGCGG GGATGGTACA GGCGCTGGGG GCCAAGCTAC GGGATGCGCA GGGCAATGAT
ATTGCGCAAG GCGGCATTGG GCTGGAAACA CTCGCCAGCA TTGATATCAG CGGCCTGGAT
AAGCGTTTGT CGGCGTGCCA TATAGAGGTC GCCTGCGATG TCACGAATCC CCTTACCGGC
AAAGAGGGCG CGTCTGCGGT TTTTGGTCCG CAAAAAGGGG CGACGCCGGA AATGATTGAA
CGCCTGGATA CGGCATTGAC TCGCTATGCG CATTTGATTG CCCGCGATCT GCATGTCGAT
GTGTTGGATC TGGCAGGCGG CGGCGCGGCA GGCGGCATGG GGGCGGCGTT ATACGCGTTT
TGCGGCGCGC AGCTACGGCG TGGTATTGAG ATTGTCACCG ATGCGCTTCA TCTGGAAGCG
TGTCTTGCGG ATGCTGATTT AGTCATCACC GGCGAGGGAC GCATCGACAG CCAGACCATT
CACGGTAAAG TCCCTATTGG CGTGGCAAAC ATCGCCAAAC GGTATAACAA GCCGGTAATT
GGTATTGCGG GTAGCCTGAC GGCGGACGTT GGCGTGGTTC ATGAACATGG GCTTGATGCC
GTTTTCAGCG TGATTTATAC CATCTGCACG TTGGAGGACG CGCTGAAGAA TGCGAGTGAA
AACGTACGAA TGACCGCGCG CAACGTGGCT GCAACGCTGA AAGCGGGGCA ACAATTACGC
TGA
 
Protein sequence
MKIVIAPDSY KESLSALEVA TAIEQGFREI WPDADYLKLP LADGGEGTVE AMVEATAGRI 
VHVEVTGPLG HRVNAFYGLS GDARSAFIEM AAASGLEQVP PAQRDPLKTT SWGTGELIRH
ALDAGVEHII IGIGGSATND GGAGMVQALG AKLRDAQGND IAQGGIGLET LASIDISGLD
KRLSACHIEV ACDVTNPLTG KEGASAVFGP QKGATPEMIE RLDTALTRYA HLIARDLHVD
VLDLAGGGAA GGMGAALYAF CGAQLRRGIE IVTDALHLEA CLADADLVIT GEGRIDSQTI
HGKVPIGVAN IAKRYNKPVI GIAGSLTADV GVVHEHGLDA VFSVIYTICT LEDALKNASE
NVRMTARNVA ATLKAGQQLR