| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3150 |
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| Symbol | cas5e |
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| ID | 6482579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3058475 |
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| End bp | 3059200 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642738458 |
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| Product | CRISPR-associated Cas5 family protein |
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| Protein accession | YP_002042182 |
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| Protein GI | 194442790 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.635269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGAAT ATCTGGTTTT TCAGCTCTAT GCGCCGCTGG CGTCGTGGGG GGAAGAAGCG
TCTGGCGAGA TTCGCCACTC AGCTACGGTT CCCACGCGCT CTGCGCTATT GGGTCTGCTT
GCCGCAGCGT TAGGAATTCG TCGCGACGAA GAAGCGCGGC TGAATAACTT TAACCAGCAC
TATCATCTGG CGGTGCACGC GTTGGCTTCA CAAGATCGCT GGTTGCGAGA TTATCACACC
GTTGGCGCGC CGCGAGAAAA CAAAAAGTAT CGTTATTACA CGCGCCGGGA TGAACTGACT
CTTGCGCCGG ATGAAGTGGG GACGCTTATC TCGCAGCGAG AATATCGCTG CGACGGCTAC
TGGCATGTGG CAATAAGCGC CACGCCTGAT GCACCACATT CGCTTAGCGA ATTGCGAGAG
GCGCTGCTGA CACCGCATTT TCCGCTCTAT CTGGGGAGAA AATCCTGCCC GCTGGCGTTA
CCGTTAGCGG CGCGTTTAAT GACCGGCACC TTAAAAGAGG TATTCACCCA TGCTGTGGAG
GAGATTTCCG CAGCAGAATT AAGTGGATTT ACCCTGCGTG AGGGCATTTG TTATTGGGAT
GATCCTGATG AGGAGAGTCT GGTCTGGCAA CAAAAGCAGC ATAGCAATAA CCAGCCAGTT
AGCCGCCAAC GCTGGCAGTT TGGCGGCTAC ACCCGCTTCA ATGGGCCGTT GCAGGAGAGA
ACATAA
|
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| Protein sequence | MKEYLVFQLY APLASWGEEA SGEIRHSATV PTRSALLGLL AAALGIRRDE EARLNNFNQH
YHLAVHALAS QDRWLRDYHT VGAPRENKKY RYYTRRDELT LAPDEVGTLI SQREYRCDGY
WHVAISATPD APHSLSELRE ALLTPHFPLY LGRKSCPLAL PLAARLMTGT LKEVFTHAVE
EISAAELSGF TLREGICYWD DPDEESLVWQ QKQHSNNQPV SRQRWQFGGY TRFNGPLQER
T
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