Gene SNSL254_A3125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3125 
Symbol 
ID6485156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp3040855 
End bp3041259 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content53% 
IMG OID642738437 
Producttranscriptional regulator HosA 
Protein accessionYP_002042161 
Protein GI194445181 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.0371002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTAC GAAACACCGC GTTTCATCTG TTACGCCAAC TTTTTCAGCA ACATACCGCA 
CGCTGGCAGC ATGAACTACC GGAGCTCACC AAACCTCAAT ATGCGGTGAT GCGCGTTATT 
GCTGAACATC CGGGTATTGA ACAGGTCGAC CTGACCGAAG CGGCGGTCAG CACTAAAGCG 
ACGCTGGCGG AGATGTTAAG CCGGATGGAA AATCGTGGGC TGGTAAAGCG AGAAAACGAT 
CCGCTGGATA AACGTCGGCG TTTTGTCTAT CTCACCGTTC AGGGCCAAAC GTTGCTCGCC 
GCCGCGATAC CACTGGGGGA TCGCGTTGAC GATGAATTTT TGGGGCGACT GAGCGCTGAA 
GAACGCGAAC AGTTTACGCA ACTGGTACGC AAGATGATGA CGTAA
 
Protein sequence
MELRNTAFHL LRQLFQQHTA RWQHELPELT KPQYAVMRVI AEHPGIEQVD LTEAAVSTKA 
TLAEMLSRME NRGLVKREND PLDKRRRFVY LTVQGQTLLA AAIPLGDRVD DEFLGRLSAE 
EREQFTQLVR KMMT