| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3119 |
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| Symbol | |
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| ID | 6483319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3035290 |
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| End bp | 3036240 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642738431 |
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| Product | NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_002042155 |
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| Protein GI | 194442216 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.0293341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATTA TCATTACCGG CGGGGGCGGC TTTTTAGGCC AGAAACTCGC AAGCGCCTTA
TTAAACTCAT CGCTGGCGTT TAACGAACTG CTTCTTGTTG ATTTAAAAAT GCCTGCACGG
TTATCAGATT CCCCTCGTTT ACGCTGCCTG GAAGCTGACT TAACCCAGCC GGGCGTGCTG
GAGAATGTGA TTACCGCTAA TACCTCTGTT GTTTATCATC TCGCTGCGAT TGTCAGCAGT
CATGCGGAAG ACGATTTTGA TCTGGGATGG AAAGTTAACC TGGATCTTAC CCGCCAGTTA
CTTGAGGCGT GTCGTTGGCA ACCGCAGAAA ATTCGTTTTG TCTTCTCCAG CTCGCTTGCC
GTTTATGGCG GTACGCTGCC GGAATGCGTC ACCGATACCA CCGCGCTCAC GCCGCGCTCG
TCTTATGGCG CGCAGAAGGC CGCCTGTGAA CTGTTGGTCA ACGACTATAC CCGCAAAGGC
TATGTGGATG GGCTGGCGCT GCGTTTGCCG ACGATCTGTG TTCGCCCGGG TAAACCAAAC
CGCGCCGCTT CTTCTTTTGT CAGCGCGATT ATTCGTGAAC CGTTGCAGGG CGAGACGACC
GTCTGCCCGG TGTCGGAAAG TTTGCGGCTG TGGATTTCCA GCCCGGCGAC GGTGATCCAT
AACCTGTCGC TGGCCGCAAC GTTACCCGCG CCTGGCGAGG CGAGCAGCAT CAACTTACCG
GGGATCAGCG TAACCGTGGG CGAGATGCTG GAAACGTTGC GTCAGGCGGG CGGCCAGGCG
GCGCGCGATC GGGTTACGCA TCAGCGCGAT GAAGGCGTCG AGAAAATTGT CGCCTCCTGG
CCGGGACGTA TCGATAACCA GCGTGCGCTG GCGTTAGGTT TTGTCGCCGA TAAACGCTTC
GATGACATTA TCGAACGCTT TCGACAAGAT GATATGGAGG GGAGGTCATG A
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| Protein sequence | MQIIITGGGG FLGQKLASAL LNSSLAFNEL LLVDLKMPAR LSDSPRLRCL EADLTQPGVL
ENVITANTSV VYHLAAIVSS HAEDDFDLGW KVNLDLTRQL LEACRWQPQK IRFVFSSSLA
VYGGTLPECV TDTTALTPRS SYGAQKAACE LLVNDYTRKG YVDGLALRLP TICVRPGKPN
RAASSFVSAI IREPLQGETT VCPVSESLRL WISSPATVIH NLSLAATLPA PGEASSINLP
GISVTVGEML ETLRQAGGQA ARDRVTHQRD EGVEKIVASW PGRIDNQRAL ALGFVADKRF
DDIIERFRQD DMEGRS
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