Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3114 |
Symbol | mutS |
ID | 6485637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3028527 |
End bp | 3031094 |
Gene Length | 2568 bp |
Protein Length | 855 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642738426 |
Product | DNA mismatch repair protein MutS |
Protein accession | YP_002042150 |
Protein GI | 194445735 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.0090493 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATGAGT CATTTGATAA GGACTTCTCC AACCACACCC CGATGATGCA GCAGTATCTC AAGCTGAAAG CCCAGCATCC GGAGATCCTG CTCTTTTATC GTATGGGAGA CTTTTACGAG CTGTTTTATG ACGACGCAAA GCGTGCGTCG CAGTTGCTCG ATATTTCGCT GACCAAACGC GGCGCATCGG CTGGCGAACC TATCCCTATG GCGGGTATCC CGCACCACGC CGTAGAAAAC TACCTCGCGA AACTGGTCAA TCAGGGCGAA TCCGTCGCTA TTTGCGAACA GATTGGCGAT CCGGCCACCA GCAAAGGTCC CGTTGAACGT AAGGTCGTGC GTATCGTTAC GCCTGGCACC ATCAGCGATG AAGCCCTGTT ACAGGAGCGT CAGGATAACC TGCTGGCGGC TATCTGGCAG GATGGTAAAG GCTACGGTTA CGCCACGCTG GATATCAGCT CCGGGCGCTT TCGTCTGAGC GAACCCGCCG ACCGTGAAAC GATGGCCGCA GAGCTGCAGC GCACCAATCC CGCCGAACTG TTGTATGCCG AAGATTTTGC TGAAATGGCG TTAATAGAGG GACGCCGGGG TCTGCGCCGT CGCCCGTTGT GGGAGTTTGA GATTGATACC GCCCGCCAGC AGTTAAATCT GCAATTCGGT ACGCGGGATC TGGTCGGTTT CGGCGTCGAA AATGCCTCGC GTGGATTATG TGCGGCAGGC TGCCTGTTAC AGTACGTAAA AGATACCCAG CGCACCTCCC TGCCGCATAT TCGTTCCATT ACGATGGAAC GCCAGCAGGA CAGCATCATT ATGGATGCCG CGACCCGCCG CAATCTGGAA ATTACCCAGA ACCTGGCCGG CGGTGTCGAA AATACCCTCG CCGCGGTGCT TGACTGTACC GTGACGCCAA TGGGTAGCCG AATGCTTAAA CGCTGGCTGC ATATGCCGGT ACGAAATACC AACATATTGC GTGAACGCCA GCAGACCATC GGCGCCTTGC AGGACACCGT CAGCGAACTG CAACCGGTGC TGCGTCAGGT CGGCGATCTG GAGCGTATCC TTGCGCGTCT GGCGCTGCGC ACCGCGCGTC CGCGCGATCT CGCCCGAATG CGTCACGCCT TCCAGCAACT GCCGGAATTG CACGCTCAGC TTGAAACCGT TGACAGCGCG CCGGTACAGG CGTTGCGTAA AAAAATGGGC GATTTCGCCG AGCTGCGCGA CCTCCTGGAA CGCGCCATTA TTGACGCGCC GCCGGTACTG GTCCGCGACG GCGGCGTTAT TGCGCCCGGC TACCATGAAG AGCTGGACGA ATGGCGCGCG CTGGCGGACG GCGCCACCGA TTATCTCGAT CGTCTGGAAA TTCGCGAGCG CGAGCGTACC GGGCTGGATA CGCTAAAAGT CGGCTATAAC GCGGTACATG GTTATTACAT TCAGATTAGC CGTGGTCAAA GCCATCTGGC GCCCATCAAT TATGTGCGTC GCCAGACGCT GAAAAATGCC GAACGCTACA TTATTCCTGA GCTTAAAGAG TACGAAGATA AAGTTCTGAC CTCGAAAGGC AAAGCGCTGG CGCTGGAAAA ACAGCTATAT GACGAATTGT TTGATCTGCT GTTGCCGCAT CTGGCCGATT TACAGCAGAG CGCCAACGCG CTGGCGGAGC TGGATGTGCT GGTTAACCTG GCCGAACGCG CCTGGACGCT GAATTACACC TGCCCGACAT TTACCGATAA ACCCGGTATC CGTATTACCG AAGGTCGCCA CCCGGTGGTT GAACAGGTAC TGAATGAGCC GTTTATCGCT AACCCGCTCA ATCTGTCGCC GCAGCGCCGA ATGTTGATCA TTACCGGCCC CAATATGGGC GGTAAAAGTA CCTATATGCG ACAAACGGCA TTGATCGCCC TGCTGGCCTA TATCGGCAGT TACGTTCCGG CGCAAAACGT GGAAATCGGC CCCATCGACC GTATTTTTAC CCGCGTCGGC GCAGCGGACG ACCTGGCCTC CGGGCGTTCG ACCTTTATGG TGGAGATGAC CGAAACCGCG AACATTCTGC ATAATGCCAC GGAAAACAGT CTGGTATTGA TGGATGAAAT CGGGCGCGGT ACCTCCACGT ATGACGGGCT GTCGTTGGCC TGGGCCTGCG CGGAGAATCT CGCGAATAAG ATTAAAGCGT TAACGCTGTT CGCTACCCAC TACTTCGAGC TGACCCAATT ACCGGAGAAA ATGGAAGGCG TGGCGAACGT CCACCTGGAT GCGCTGGAAC ACGGCGATAC TATCGCGTTT ATGCACAGCG TGCAGGACGG CGCGGCAAGT AAGAGCTATG GCCTGGCGGT CGCGGCGCTT GCGGGCGTCC CTAAAGAAGT CATCAAACGC GCGCGCCAGA AACTCCGCGA GCTGGAAAGC ATCTCGCCCA ATGCGGCGGC AACGCAGGTG GACGGCACGC AAATGTCGTT GCTTGCGGCC CCGGAGGAGA CATCGCCTGC CGTTGAAGCG CTGGAAAATC TCGATCCGGA CTCTCTGACG CCACGCCAGG CGCTGGAGTG GATCTATCGG CTGAAAAGTC TGGTGTAA
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Protein sequence | MNESFDKDFS NHTPMMQQYL KLKAQHPEIL LFYRMGDFYE LFYDDAKRAS QLLDISLTKR GASAGEPIPM AGIPHHAVEN YLAKLVNQGE SVAICEQIGD PATSKGPVER KVVRIVTPGT ISDEALLQER QDNLLAAIWQ DGKGYGYATL DISSGRFRLS EPADRETMAA ELQRTNPAEL LYAEDFAEMA LIEGRRGLRR RPLWEFEIDT ARQQLNLQFG TRDLVGFGVE NASRGLCAAG CLLQYVKDTQ RTSLPHIRSI TMERQQDSII MDAATRRNLE ITQNLAGGVE NTLAAVLDCT VTPMGSRMLK RWLHMPVRNT NILRERQQTI GALQDTVSEL QPVLRQVGDL ERILARLALR TARPRDLARM RHAFQQLPEL HAQLETVDSA PVQALRKKMG DFAELRDLLE RAIIDAPPVL VRDGGVIAPG YHEELDEWRA LADGATDYLD RLEIRERERT GLDTLKVGYN AVHGYYIQIS RGQSHLAPIN YVRRQTLKNA ERYIIPELKE YEDKVLTSKG KALALEKQLY DELFDLLLPH LADLQQSANA LAELDVLVNL AERAWTLNYT CPTFTDKPGI RITEGRHPVV EQVLNEPFIA NPLNLSPQRR MLIITGPNMG GKSTYMRQTA LIALLAYIGS YVPAQNVEIG PIDRIFTRVG AADDLASGRS TFMVEMTETA NILHNATENS LVLMDEIGRG TSTYDGLSLA WACAENLANK IKALTLFATH YFELTQLPEK MEGVANVHLD ALEHGDTIAF MHSVQDGAAS KSYGLAVAAL AGVPKEVIKR ARQKLRELES ISPNAAATQV DGTQMSLLAA PEETSPAVEA LENLDPDSLT PRQALEWIYR LKSLV
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