Gene SNSL254_A3107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3107 
Symbol 
ID6485725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3023845 
End bp3024126 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content49% 
IMG OID642738419 
Productputative ABC-type transport system 
Protein accessionYP_002042143 
Protein GI194445999 
COG category[S] Function unknown 
COG ID[COG4453] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.000122427 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTCAGA TAGCTATAGA ATCTAACGAA AGGCTGTCGT TGCGTGTATC GACGGATGCC 
AAAAAGTTGA TAGTCCGCGC TGCGGCAATC CAGCAAACCA ACCTGACGGA TTTTGTGGTC
AGTAACGTAC TACCTGTCGC ACAGAAGATT GTTGATGCCG CCGAACGGGT ATATCTGACG
GAGCGCGATA CTCAAATGAT CATGGAAATT TTAGATAACC CGCCAGCGCC GAATGAAAAG
CTTCTTGCCG CTGCTTTCGC CCTGCCGGAC ATGAAGAAAT GA
 
Protein sequence
MPQIAIESNE RLSLRVSTDA KKLIVRAAAI QQTNLTDFVV SNVLPVAQKI VDAAERVYLT 
ERDTQMIMEI LDNPPAPNEK LLAAAFALPD MKK