| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3101 |
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| Symbol | |
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| ID | 6483908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3014904 |
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| End bp | 3016961 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642738413 |
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| Product | invasion protein InvA |
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| Protein accession | YP_002042137 |
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| Protein GI | 194444273 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4789] Type III secretory pathway, component EscV |
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| TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.758436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.000000202364 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCTGCTTT CTCTACTTAA CAGTGCTCGT TTACGACCTG AATTACTGAT TCTGGTACTA
ATGGTGATGA TCATTTCTAT GTTCGTCATT CCATTACCTA CCTATCTGGT TGATTTCCTG
ATCGCACTGA ATATCGTACT GGCGATATTG GTGTTTATGG GGTCGTTCTA CATTGACAGA
ATCCTCAGTT TTTCAACGTT TCCTGCGGTA CTGTTAATTA CCACGCTCTT TCGTCTGGCA
TTATCGATCA GTACCAGTCG TCTTATCTTG ATTGAAGCCG ATGCCGGTGA AATTATCGCC
ACGTTCGGGC AATTCGTTAT TGGCGATAGC CTGGCGGTGG GTTTTGTTGT CTTCTCTATT
GTCACCGTGG TCCAGTTTAT CGTTATTACC AAAGGTTCAG AACGTGTCGC GGAAGTCGCG
GCCCGATTTT CTCTGGATGG TATGCCCGGT AAACAGATGA GTATTGATGC CGATTTGAAG
GCCGGTATTA TTGATGCGGA TGCTGCGCGC GAACGGCGAA GCGTACTGGA AAGGGAAAGC
CAGCTTTACG GTTCCTTTGA CGGTGCGATG AAGTTTATCA AAGGTGACGC TATTGCCGGC
ATCATTATTA TCTTTGTGAA CTTTATTGGC GGTATTTCGG TGGGGATGAC CCGCCATGGT
ATGGATTTGT CCTCCGCCCT GTCTACTTAT ACCATGCTGA CCATTGGTGA TGGTCTTGTC
GCCCAGATCC CCGCATTGTT GATTGCGATT AGTGCCGGTT TTATCGTGAC TCGCGTAAAT
GGCGATAGCG ATAATATGGG GCGGAATATC ATGACGCAGC TGTTGAACAA CCCATTTGTA
TTGGTTGTTA CGGCTATTTT GACCATTTCA ATGGGAACTC TGCCGGGATT CCCGCTGCCG
GTTTTTGTTA TTTTATCGGT GGTTTTAAGC GTACTCTTCT ATTTTAAATT CCGTGAAGCA
AAACGTAGTG CCGCCAAACC TAAAACCAGC AAAGGCGAGC AGCCGCTCAG TATTGAGGAA
AAAGAAGGGT CGTCGTTAGG ACTGATTGGC GATCTCGATA AAGTCTCTAC AGAGACCGTA
CCGTTGATAT TACTTGTGCC GAAGAGCCGG CGTGAAGATC TGGAAAAAGC TCAACTTGCG
GAGCGTCTAC GTAGTCAGTT CTTTATTGAT TATGGCGTGC GCCTGCCGGA AGTATTGTTA
CGCGATGGCG AGGGCCTGGA CGATAACAGC ATCGTATTGT TGATTAATGA GATCCGTGTT
GAACAATTTA CGGTCTATTT TGATTTGATG CGAGTGGTAA ATTATTCCGA TGAAGTTGTT
TCCTTTGGCA TTAATCCAAC AATCTATCAG CAAGGTAGCA GCCAGTATTT CTGGGTAACG
CATGAAGAGG GGGAGAAACT CCGGGAGCTT GGCTATGTGT TGCGGAACGC GCTTGATGAG
CTTTACCACT GTCTGGCGGT GACGCTGGCG CGCAACGTCA ATGAATATTT CGGTATTCAG
GAAACAAAAC ATATGCTGGA CCAACTGGAA GCGAAATTTC CTGATTTACT TAAAGAAGTG
CTCAGACATG CCACGGTACA ACGTATATCT GAAGTTTTGC AGCGTTTGTT AAGCGAACGT
GTTTCCGTGC GTAATATGAA ATTAATTATG GAAGCGCTCG CATTGTGGGC GCCAAGAGAA
AAAGATGTCA TTAACCTTGT GGAGCATATT CGTGGGGCAA TGGCGCGTTA TATTTGCCAT
AAATTCGCCA ATGGCGGCGA ATTACGAGCA GTAATGGTAT CTGCTGAAGT TGAGGATGTT
ATTCGCAAAG GGATCCGTCA GACCTCTGGC AGTACCTTCC TCAGCCTTGA CCCGGAAGCC
TCCGCTAATT TGATGGATCT CATTACACTT AAGTTGGATG ATTTATTGAT TGCACATAAA
GATCTTGTCC TCCTTACGTC TGTCGATGTC CGTCGATTTA TTAAGAAAAT GATTGAAGGT
CGTTTTCCGG ATCTGGAGGT TTTATCTTTC GGTGAGATAG CAGATAGCAA GTCAGTGAAT
GTTATAAAAA CAATATAA
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| Protein sequence | MLLSLLNSAR LRPELLILVL MVMIISMFVI PLPTYLVDFL IALNIVLAIL VFMGSFYIDR
ILSFSTFPAV LLITTLFRLA LSISTSRLIL IEADAGEIIA TFGQFVIGDS LAVGFVVFSI
VTVVQFIVIT KGSERVAEVA ARFSLDGMPG KQMSIDADLK AGIIDADAAR ERRSVLERES
QLYGSFDGAM KFIKGDAIAG IIIIFVNFIG GISVGMTRHG MDLSSALSTY TMLTIGDGLV
AQIPALLIAI SAGFIVTRVN GDSDNMGRNI MTQLLNNPFV LVVTAILTIS MGTLPGFPLP
VFVILSVVLS VLFYFKFREA KRSAAKPKTS KGEQPLSIEE KEGSSLGLIG DLDKVSTETV
PLILLVPKSR REDLEKAQLA ERLRSQFFID YGVRLPEVLL RDGEGLDDNS IVLLINEIRV
EQFTVYFDLM RVVNYSDEVV SFGINPTIYQ QGSSQYFWVT HEEGEKLREL GYVLRNALDE
LYHCLAVTLA RNVNEYFGIQ ETKHMLDQLE AKFPDLLKEV LRHATVQRIS EVLQRLLSER
VSVRNMKLIM EALALWAPRE KDVINLVEHI RGAMARYICH KFANGGELRA VMVSAEVEDV
IRKGIRQTSG STFLSLDPEA SANLMDLITL KLDDLLIAHK DLVLLTSVDV RRFIKKMIEG
RFPDLEVLSF GEIADSKSVN VIKTI
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