Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3099 |
Symbol | |
ID | 6483525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3013181 |
End bp | 3014476 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642738411 |
Product | ATP synthase SpaL |
Protein accession | YP_002042135 |
Protein GI | 194444136 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0585331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.00000194741 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACAC CTCGTTTACT GCAATATCTG GCCTACCCAC AAAAAATAAC CGGCCCAATT ATTGAGGCGG AATTGCGCGA TGTAGCCATT GGCGAACTGT GTGAAATACG CCGTGGCTGG CACCAAAAAC AGGTTGTTGC ACGTGCGCAG GTGGTTGGCT TACAGCGGGA ACGCACTGTG CTGAGCCTTA TCGGCAACGC CCAGGGGCTG AGCCGCGATG TCGTGCTTTA TCCCACTGGA CGTGCGTTAT CGGCGTGGGT GGGATACTCG GTATTAGGCG CGGTGTTGGA TCCGACGGGG AAAATCGTTG AGCGTTTTAC CCCTGAAGTG GCGCCGATTA GCGAAGAACG CGTTATTGAT GTCGCACCGC CTTCTTACGC TTCGCGCGTT GGCGTTCGTG AACCGCTGAT TACCGGTGTG CGCGCGATTG ACGGGTTATT GACCTGTGGC GTAGGCCAGC GAATGGGCAT TTTTGCTTCC GCAGGATGCG GTAAGACCAT GCTGATGCAT ATGCTGATCG AGCAAACGGA GGCGGATGTT TTTGTTATTG GTCTTATCGG TGAACGAGGC CGCGAGGTCA CTGAATTCGT GGATATGTTG CGCGCTTCGC ATAAGAAAGA AAAATGCGTG CTGGTTTTTG CCACTTCCGA TTTCCCCTCG GTCGATCGCT GCAATGCGGC GCAACTGGCG ACAACCGTAG CGGAATATTT TCGCGACCAG GGAAAACGGG TCGTGCTTTT TATCGATTCC ATGACCCGTT ATGCGCGTGC TTTGCGAGAC GTGGCACTGG CGTCGGGAGA GCGTCCGGCC CGTCGAGGTT ATCCCGCCTC CGTATTCGAT AATTTGCCCC GCTTGCTGGA ACGCCCCGGG GCGACCAGCG AGGGAAGCAT TACTGCCTTT TATACGGTAC TGCTGGAAAG CGAGGAAGAG GCGGACCCGA TGGCGGATGA AATTCGCTCT ATCCTTGACG GTCACCTGTA TCTGAGCAGA AAGCTGGCCG GGCAGGGACA TTACCCGGCA ATCGATGTAC TGAAAAGCGT AAGCCGCGTT TTTGGACAAG TCACGACGCC GACACATGCT GAACAGGCAT CTGCCGTGCG TAAATTAATG ACGCGTCTGG AAGAGCTCCA GCTTTTCATT GACTTGGGAG AATATCGTCC TGGCGAAAAT ATCGATAACG ATCGGGCGAT GCAGATGCGG GATAGCCTGA AAGCCTGGTT ATGCCAGCCG GTAGCGCAAT ATTCATCCTT TGATGACACG TTGAGCGGTA TGAATGCATT CGCTGACCAG AATTAA
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Protein sequence | MKTPRLLQYL AYPQKITGPI IEAELRDVAI GELCEIRRGW HQKQVVARAQ VVGLQRERTV LSLIGNAQGL SRDVVLYPTG RALSAWVGYS VLGAVLDPTG KIVERFTPEV APISEERVID VAPPSYASRV GVREPLITGV RAIDGLLTCG VGQRMGIFAS AGCGKTMLMH MLIEQTEADV FVIGLIGERG REVTEFVDML RASHKKEKCV LVFATSDFPS VDRCNAAQLA TTVAEYFRDQ GKRVVLFIDS MTRYARALRD VALASGERPA RRGYPASVFD NLPRLLERPG ATSEGSITAF YTVLLESEEE ADPMADEIRS ILDGHLYLSR KLAGQGHYPA IDVLKSVSRV FGQVTTPTHA EQASAVRKLM TRLEELQLFI DLGEYRPGEN IDNDRAMQMR DSLKAWLCQP VAQYSSFDDT LSGMNAFADQ N
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