Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3094 |
Symbol | |
ID | 6482177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3009889 |
End bp | 3010149 |
Gene Length | 261 bp |
Protein Length | 86 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642738406 |
Product | hypothetical protein |
Protein accession | YP_002042130 |
Protein GI | 194446370 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4794] Type III secretory pathway, component EscS |
TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00000227006 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATGATT TAGTGTTTGC AGGTAATAAG GCGCTCTATC TTGTTTTGAT CCTGTCAGGG TGGCCGACGA TTGTCGCAAC GATTATCGGC CTCCTGGTAG GGTTATTCCA GACGGTAACG CAATTACAGG AACAGACGCT GCCTTTTGGC ATTAAATTAC TTGGCGTGTG TTTATGCTTG TTTTTACTGT CTGGCTGGTA TGGCGAAGTT TTACTCTCTT ACGGGCGTCA GGTGATATTC CTGGCGTTGG CTAAGGGGTA A
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Protein sequence | MDDLVFAGNK ALYLVLILSG WPTIVATIIG LLVGLFQTVT QLQEQTLPFG IKLLGVCLCL FLLSGWYGEV LLSYGRQVIF LALAKG
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