Gene SNSL254_A3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3094 
Symbol 
ID6482177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3009889 
End bp3010149 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content47% 
IMG OID642738406 
Producthypothetical protein 
Protein accessionYP_002042130 
Protein GI194446370 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4794] Type III secretory pathway, component EscS 
TIGRFAM ID[TIGR01403] type III secretion protein, HrpO family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00000227006 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGATT TAGTGTTTGC AGGTAATAAG GCGCTCTATC TTGTTTTGAT CCTGTCAGGG 
TGGCCGACGA TTGTCGCAAC GATTATCGGC CTCCTGGTAG GGTTATTCCA GACGGTAACG
CAATTACAGG AACAGACGCT GCCTTTTGGC ATTAAATTAC TTGGCGTGTG TTTATGCTTG
TTTTTACTGT CTGGCTGGTA TGGCGAAGTT TTACTCTCTT ACGGGCGTCA GGTGATATTC
CTGGCGTTGG CTAAGGGGTA A
 
Protein sequence
MDDLVFAGNK ALYLVLILSG WPTIVATIIG LLVGLFQTVT QLQEQTLPFG IKLLGVCLCL 
FLLSGWYGEV LLSYGRQVIF LALAKG