| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3080 |
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| Symbol | |
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| ID | 6484699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 2994340 |
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| End bp | 2995269 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 642738394 |
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| Product | transcriptional regulator HilD |
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| Protein accession | YP_002042118 |
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| Protein GI | 194442403 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.145156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.000243626 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAATG TAACCTTTGT AAGTAATAGT CATCAGCGTC CTGCCGCAGA TAACTTACAG
AAATTAAAAT CACTTTTGAC AAATACCCAG CAGCAAATTA AAAGTCAGAC TCAGCAGGTT
ACCATCAAAA ATCTTTATGT AAGCAGTTTC ACTTTAGTTT GCTTTCGGAG CGGTAAACTG
ACGATTAGCA ATAATCACGA TACGATTTAC TGTGACGAAC CTGGGATGTT GGTGCTCAAA
AAAGAGCAGG TAGTTAACGT GACGCTTGAA GAGGTCAATG GCCACATGGA TTTCGATATA
CTCGAGATAC CGACGCAACG ACTTGGCGCT CTCTATGCAC TTATCCCAAA CGAGCAGCAA
ACCAAAATGG CGGTACCCAC AGAGAAAGCG CAGAAAATCT TCTATACGCC TGACTTTCCT
GCCAGAAGAG AGGTATTTGA ACATCTGAAA ACGGCGTTCT CCTGTACGAA GGATACAAGC
AAAGGTTGCA GTAACTGTAA CAACAAAAGT TGTATTGAAA ATGAAGAGTT AATTCCTTAT
TTTCTGCTGT TCCTGCTTAC TGCTTTTCTC CGACTCCCGG AGAGTTATGA GATCATCCTT
AGCTCGGCTC AGATAACGTT AAAGGAGCGC GTTTACAACA TTATATCTTC GTCACCCAGT
AGACAGTGGA AGCTTACGGA TGTTGCCGAT CATATATTTA TGAGTACGTC AACGCTCAAA
CGGAAACTTG CAGAAGAAGG TACCAGCTTT AGCGACATCT ACTTATCGGC AAGAATGAAT
CAGGCAGCAA AACTTTTACG CATAGGCAAC CATAATGTTA ATGCTGTAGC ATTAAAATGT
GGTTATGATA GCACGTCCTA CTTCATTCAA TGTTTCAAAA AATATTTTAA AACTACGCCA
TCGACATTCA TAAAAATGGC GAACCATTAA
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| Protein sequence | MENVTFVSNS HQRPAADNLQ KLKSLLTNTQ QQIKSQTQQV TIKNLYVSSF TLVCFRSGKL
TISNNHDTIY CDEPGMLVLK KEQVVNVTLE EVNGHMDFDI LEIPTQRLGA LYALIPNEQQ
TKMAVPTEKA QKIFYTPDFP ARREVFEHLK TAFSCTKDTS KGCSNCNNKS CIENEELIPY
FLLFLLTAFL RLPESYEIIL SSAQITLKER VYNIISSSPS RQWKLTDVAD HIFMSTSTLK
RKLAEEGTSF SDIYLSARMN QAAKLLRIGN HNVNAVALKC GYDSTSYFIQ CFKKYFKTTP
STFIKMANH
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