| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3076 |
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| Symbol | |
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| ID | 6482649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2991500 |
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| End bp | 2992258 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642738390 |
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| Product | type III secretion apparatus lipoprotein YscJ/HrcJ family |
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| Protein accession | YP_002042114 |
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| Protein GI | 194446696 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.000940676 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTCGTC GATATCTATA TACTTTTCTG CTGGTAATGA CCCTTGCCGG CTGTAAGGAT
AAGGATCTTT TAAAAGGACT GGACCAGGAA CAGGCTAATG AGGTCATTGC CGTTCTGCAA
ATGCACAATA TAGAGGCGAA TAAAATTGAT AGCGGAAAAT TGGGCTATAG CATTACCGTT
GCTGAGCCTG ATTTTACCGC TGCGGTGTAC TGGATTAAAA CTTATCAGCT TCCTCCCCGG
CCACGGGTGG AAATAGCGCA GATGTTCCCG GCGGATTCGC TGGTATCGTC TCCGCGAGCT
GAAAAGGCCA GGTTATATTC GGCTATTGAA CAGCGACTGG AACAGTCATT ACAGACGATG
GAGGGCGTGC TCTCCGCCAG GGTCCATATT AGTTATGATA TTGATGCTGG TGAAAATGGC
CGCCCGCCAA AACCTGTTCA TCTGTCGGCA TTAGCCGTAT ATGAACGAGG TTCGCCGCTT
GCGCATCAGA TCAGCGATAT CAAGCGTTTC TTAAAGAATA GTTTTGCCGA TGTGGATTAT
GACAACATTT CTGTTGTGTT GTCAGAACGT TCTGATGCCC AATTACAGGC TCCCGGCACA
CCAGTAAAAC GTAATTCTTT TGCAACCAGT TGGATTGTGT TGATTATTTT GTTATCCGTG
ATGTCAGCAG GCTTTGGCGT CTGGTATTAC AAAAACCATT ATGCCCGCAA TAAGAAAGGC
ATAACGGCTG ATGATAAGGC GAAATCGTCA AATGAATAG
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| Protein sequence | MIRRYLYTFL LVMTLAGCKD KDLLKGLDQE QANEVIAVLQ MHNIEANKID SGKLGYSITV
AEPDFTAAVY WIKTYQLPPR PRVEIAQMFP ADSLVSSPRA EKARLYSAIE QRLEQSLQTM
EGVLSARVHI SYDIDAGENG RPPKPVHLSA LAVYERGSPL AHQISDIKRF LKNSFADVDY
DNISVVLSER SDAQLQAPGT PVKRNSFATS WIVLIILLSV MSAGFGVWYY KNHYARNKKG
ITADDKAKSS NE
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